Gene : Thecc1EG011992 T. cacao v1.1
Defline:  (1 of 5) 1.3.5.1 - Succinate dehydrogenase (quinone) / Succinic dehydrogenase Genomic Order:  53
Name:  ? Thecc1EG011992 Secondary Identifier:  ? PAC:27447337
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3781 Theobroma cacao pathologic  
Tcacao PWY-4302 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY-7279 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011992 0.5kb upstream 0.5kb upstream 2582 true scaffold_3: 351611-354192 Theobroma cacao
Thecc1EG011992 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 351611-352110 Theobroma cacao
Thecc1EG011992 0.5kb downstream 0.5kb downstream 2582 true scaffold_3: 352111-354692 Theobroma cacao
Thecc1EG011992 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 354193-354692 Theobroma cacao
Thecc1EG011992 1.0kb upstream 1.0kb upstream 3082 true scaffold_3: 351111-354192 Theobroma cacao
Thecc1EG011992 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 351111-352110 Theobroma cacao
Thecc1EG011992 1.0kb downstream 1.0kb downstream 3082 true scaffold_3: 352111-355192 Theobroma cacao
Thecc1EG011992 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 354193-355192 Theobroma cacao
Thecc1EG011992 2.0kb upstream 2.0kb upstream 4082 true scaffold_3: 350111-354192 Theobroma cacao
Thecc1EG011992 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 350111-352110 Theobroma cacao
Thecc1EG011992 2.0kb downstream 2.0kb downstream 4082 true scaffold_3: 352111-356192 Theobroma cacao
Thecc1EG011992 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 354193-356192 Theobroma cacao
Thecc1EG011992 5.0kb upstream 5.0kb upstream 7082 true scaffold_3: 347111-354192 Theobroma cacao
Thecc1EG011992 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 347111-352110 Theobroma cacao
Thecc1EG011992 5.0kb downstream 5.0kb downstream 7082 true scaffold_3: 352111-359192 Theobroma cacao
Thecc1EG011992 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 354193-359192 Theobroma cacao
Thecc1EG011992 10.0kb upstream 10.0kb upstream 12082 true scaffold_3: 342111-354192 Theobroma cacao
Thecc1EG011992 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 342111-352110 Theobroma cacao
Thecc1EG011992 10.0kb downstream 10.0kb downstream 12082 true scaffold_3: 352111-364192 Theobroma cacao
Thecc1EG011992 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 354193-364192 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827409 5264 Brassicales-Malvales View MSA
124342767 5266 SBM View MSA
124236877 5268 Malvidae View MSA
124067632 5270 Rosid View MSA
123745079 5271 Pentapetalae View MSA
122786270 5272 Eudicot View MSA
122044118 5273 Angiosperm View MSA
121344949 5274 Embryophyte View MSA
123380132 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain