Gene : Thecc1EG011965 T. cacao v1.1
Defline:  (1 of 3) PF06522 - NADH-ubiquinone reductase complex 1 MLRQ subunit (B12D) Genomic Order:  28
Name:  ? Thecc1EG011965 Secondary Identifier:  ? PAC:27447982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011965 0.5kb upstream 0.5kb upstream 2495 true scaffold_3: 224758-227252 Theobroma cacao
Thecc1EG011965 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 224758-225257 Theobroma cacao
Thecc1EG011965 0.5kb downstream 0.5kb downstream 2495 true scaffold_3: 225258-227752 Theobroma cacao
Thecc1EG011965 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 227253-227752 Theobroma cacao
Thecc1EG011965 1.0kb upstream 1.0kb upstream 2995 true scaffold_3: 224258-227252 Theobroma cacao
Thecc1EG011965 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 224258-225257 Theobroma cacao
Thecc1EG011965 1.0kb downstream 1.0kb downstream 2995 true scaffold_3: 225258-228252 Theobroma cacao
Thecc1EG011965 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 227253-228252 Theobroma cacao
Thecc1EG011965 2.0kb upstream 2.0kb upstream 3995 true scaffold_3: 223258-227252 Theobroma cacao
Thecc1EG011965 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 223258-225257 Theobroma cacao
Thecc1EG011965 2.0kb downstream 2.0kb downstream 3995 true scaffold_3: 225258-229252 Theobroma cacao
Thecc1EG011965 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 227253-229252 Theobroma cacao
Thecc1EG011965 5.0kb upstream 5.0kb upstream 6995 true scaffold_3: 220258-227252 Theobroma cacao
Thecc1EG011965 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 220258-225257 Theobroma cacao
Thecc1EG011965 5.0kb downstream 5.0kb downstream 6995 true scaffold_3: 225258-232252 Theobroma cacao
Thecc1EG011965 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 227253-232252 Theobroma cacao
Thecc1EG011965 10.0kb upstream 10.0kb upstream 11995 true scaffold_3: 215258-227252 Theobroma cacao
Thecc1EG011965 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 215258-225257 Theobroma cacao
Thecc1EG011965 10.0kb downstream 10.0kb downstream 11995 true scaffold_3: 225258-237252 Theobroma cacao
Thecc1EG011965 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 227253-237252 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834313 5264 Brassicales-Malvales View MSA
124349900 5266 SBM View MSA
124244166 5268 Malvidae View MSA
124070084 5270 Rosid View MSA
123746560 5271 Pentapetalae View MSA
122794120 5272 Eudicot View MSA
122049725 5273 Angiosperm View MSA
121344537 5274 Embryophyte View MSA
123428390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain