Gene : Thecc1EG011955 T. cacao v1.1
Defline:  (1 of 11) PF02985 - HEAT repeat (HEAT) Genomic Order:  18
Name:  ? Thecc1EG011955 Secondary Identifier:  ? PAC:27448226
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011955 0.5kb upstream 0.5kb upstream 8974 true scaffold_3: 177048-186021 Theobroma cacao
Thecc1EG011955 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 185522-186021 Theobroma cacao
Thecc1EG011955 0.5kb downstream 0.5kb downstream 8974 true scaffold_3: 176548-185521 Theobroma cacao
Thecc1EG011955 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 176548-177047 Theobroma cacao
Thecc1EG011955 1.0kb upstream 1.0kb upstream 9474 true scaffold_3: 177048-186521 Theobroma cacao
Thecc1EG011955 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 185522-186521 Theobroma cacao
Thecc1EG011955 1.0kb downstream 1.0kb downstream 9474 true scaffold_3: 176048-185521 Theobroma cacao
Thecc1EG011955 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 176048-177047 Theobroma cacao
Thecc1EG011955 2.0kb upstream 2.0kb upstream 10474 true scaffold_3: 177048-187521 Theobroma cacao
Thecc1EG011955 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 185522-187521 Theobroma cacao
Thecc1EG011955 2.0kb downstream 2.0kb downstream 10474 true scaffold_3: 175048-185521 Theobroma cacao
Thecc1EG011955 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 175048-177047 Theobroma cacao
Thecc1EG011955 5.0kb upstream 5.0kb upstream 13474 true scaffold_3: 177048-190521 Theobroma cacao
Thecc1EG011955 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 185522-190521 Theobroma cacao
Thecc1EG011955 5.0kb downstream 5.0kb downstream 13474 true scaffold_3: 172048-185521 Theobroma cacao
Thecc1EG011955 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 172048-177047 Theobroma cacao
Thecc1EG011955 10.0kb upstream 10.0kb upstream 18474 true scaffold_3: 177048-195521 Theobroma cacao
Thecc1EG011955 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 185522-195521 Theobroma cacao
Thecc1EG011955 10.0kb downstream 10.0kb downstream 18474 true scaffold_3: 167048-185521 Theobroma cacao
Thecc1EG011955 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 167048-177047 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
123833216 5264 Brassicales-Malvales View MSA
124345883 5266 SBM View MSA
124242441 5268 Malvidae View MSA
124069706 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain