Gene : Thecc1EG011927 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2
Name:  ? Thecc1EG011927 Secondary Identifier:  ? PAC:27446703
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011927 0.5kb upstream 0.5kb upstream 2530 true scaffold_3: 9906-12435 Theobroma cacao
Thecc1EG011927 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9906-10405 Theobroma cacao
Thecc1EG011927 0.5kb downstream 0.5kb downstream 2530 true scaffold_3: 10406-12935 Theobroma cacao
Thecc1EG011927 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12436-12935 Theobroma cacao
Thecc1EG011927 1.0kb upstream 1.0kb upstream 3030 true scaffold_3: 9406-12435 Theobroma cacao
Thecc1EG011927 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9406-10405 Theobroma cacao
Thecc1EG011927 1.0kb downstream 1.0kb downstream 3030 true scaffold_3: 10406-13435 Theobroma cacao
Thecc1EG011927 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12436-13435 Theobroma cacao
Thecc1EG011927 2.0kb upstream 2.0kb upstream 4030 true scaffold_3: 8406-12435 Theobroma cacao
Thecc1EG011927 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8406-10405 Theobroma cacao
Thecc1EG011927 2.0kb downstream 2.0kb downstream 4030 true scaffold_3: 10406-14435 Theobroma cacao
Thecc1EG011927 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12436-14435 Theobroma cacao
Thecc1EG011927 5.0kb upstream 5.0kb upstream 7030 true scaffold_3: 5406-12435 Theobroma cacao
Thecc1EG011927 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5406-10405 Theobroma cacao
Thecc1EG011927 5.0kb downstream 5.0kb downstream 7030 true scaffold_3: 10406-17435 Theobroma cacao
Thecc1EG011927 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12436-17435 Theobroma cacao
Thecc1EG011927 10.0kb upstream 10.0kb upstream 12030 true scaffold_3: 406-12435 Theobroma cacao
Thecc1EG011927 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 406-10405 Theobroma cacao
Thecc1EG011927 10.0kb downstream 10.0kb downstream 12030 true scaffold_3: 10406-22435 Theobroma cacao
Thecc1EG011927 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12436-22435 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833801 5264 Brassicales-Malvales View MSA
124339836 5266 SBM View MSA
124242471 5268 Malvidae View MSA
124063725 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain