Gene : Thecc1EG046316 T. cacao v1.1
Defline:  (1 of 33) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  3
Name:  ? Thecc1EG046316 Secondary Identifier:  ? PAC:27459524
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046316 0.5kb upstream 0.5kb upstream 2180 true scaffold_262: 2066-4245 Theobroma cacao
Thecc1EG046316 0.5kb upstream 0.5kb upstream 500 false scaffold_262: 2066-2565 Theobroma cacao
Thecc1EG046316 0.5kb downstream 0.5kb downstream 2180 true scaffold_262: 2566-4745 Theobroma cacao
Thecc1EG046316 0.5kb downstream 0.5kb downstream 500 false scaffold_262: 4246-4745 Theobroma cacao
Thecc1EG046316 1.0kb upstream 1.0kb upstream 2680 true scaffold_262: 1566-4245 Theobroma cacao
Thecc1EG046316 1.0kb upstream 1.0kb upstream 1000 false scaffold_262: 1566-2565 Theobroma cacao
Thecc1EG046316 1.0kb downstream 1.0kb downstream 2680 true scaffold_262: 2566-5245 Theobroma cacao
Thecc1EG046316 1.0kb downstream 1.0kb downstream 1000 false scaffold_262: 4246-5245 Theobroma cacao
Thecc1EG046316 2.0kb upstream 2.0kb upstream 3680 true scaffold_262: 566-4245 Theobroma cacao
Thecc1EG046316 2.0kb upstream 2.0kb upstream 2000 false scaffold_262: 566-2565 Theobroma cacao
Thecc1EG046316 2.0kb downstream 2.0kb downstream 3680 true scaffold_262: 2566-6245 Theobroma cacao
Thecc1EG046316 2.0kb downstream 2.0kb downstream 2000 false scaffold_262: 4246-6245 Theobroma cacao
Thecc1EG046316 5.0kb upstream 5.0kb upstream 4245 true scaffold_262: 1-4245 Theobroma cacao
Thecc1EG046316 5.0kb upstream 5.0kb upstream 2565 false scaffold_262: 1-2565 Theobroma cacao
Thecc1EG046316 5.0kb downstream 5.0kb downstream 4151 true scaffold_262: 2566-6716 Theobroma cacao
Thecc1EG046316 5.0kb downstream 5.0kb downstream 2471 false scaffold_262: 4246-6716 Theobroma cacao
Thecc1EG046316 10.0kb upstream 10.0kb upstream 4245 true scaffold_262: 1-4245 Theobroma cacao
Thecc1EG046316 10.0kb upstream 10.0kb upstream 2565 false scaffold_262: 1-2565 Theobroma cacao
Thecc1EG046316 10.0kb downstream 10.0kb downstream 4151 true scaffold_262: 2566-6716 Theobroma cacao
Thecc1EG046316 10.0kb downstream 10.0kb downstream 2471 false scaffold_262: 4246-6716 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823924 5264 Brassicales-Malvales View MSA
124351826 5266 SBM View MSA
124249501 5268 Malvidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain