Gene : Thecc1EG047002 T. cacao v1.1
Defline:  (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) Genomic Order:  1459
Name:  ? Thecc1EG047002 Secondary Identifier:  ? PAC:27461799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047002 0.5kb upstream 0.5kb upstream 2962 true scaffold_2: 8057333-8060294 Theobroma cacao
Thecc1EG047002 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8059795-8060294 Theobroma cacao
Thecc1EG047002 0.5kb downstream 0.5kb downstream 2962 true scaffold_2: 8056833-8059794 Theobroma cacao
Thecc1EG047002 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8056833-8057332 Theobroma cacao
Thecc1EG047002 1.0kb upstream 1.0kb upstream 3462 true scaffold_2: 8057333-8060794 Theobroma cacao
Thecc1EG047002 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8059795-8060794 Theobroma cacao
Thecc1EG047002 1.0kb downstream 1.0kb downstream 3462 true scaffold_2: 8056333-8059794 Theobroma cacao
Thecc1EG047002 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8056333-8057332 Theobroma cacao
Thecc1EG047002 2.0kb upstream 2.0kb upstream 4462 true scaffold_2: 8057333-8061794 Theobroma cacao
Thecc1EG047002 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8059795-8061794 Theobroma cacao
Thecc1EG047002 2.0kb downstream 2.0kb downstream 4462 true scaffold_2: 8055333-8059794 Theobroma cacao
Thecc1EG047002 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8055333-8057332 Theobroma cacao
Thecc1EG047002 5.0kb upstream 5.0kb upstream 7462 true scaffold_2: 8057333-8064794 Theobroma cacao
Thecc1EG047002 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8059795-8064794 Theobroma cacao
Thecc1EG047002 5.0kb downstream 5.0kb downstream 7462 true scaffold_2: 8052333-8059794 Theobroma cacao
Thecc1EG047002 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8052333-8057332 Theobroma cacao
Thecc1EG047002 10.0kb upstream 10.0kb upstream 12462 true scaffold_2: 8057333-8069794 Theobroma cacao
Thecc1EG047002 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8059795-8069794 Theobroma cacao
Thecc1EG047002 10.0kb downstream 10.0kb downstream 12462 true scaffold_2: 8047333-8059794 Theobroma cacao
Thecc1EG047002 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8047333-8057332 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124242443 5268 Malvidae View MSA
123838022 5264 Brassicales-Malvales View MSA
124339138 5266 SBM View MSA
124065394 5270 Rosid View MSA
123740657 5271 Pentapetalae View MSA
122786663 5272 Eudicot View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain