Gene : Thecc1EG047007 T. cacao v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  2798
Name:  ? Thecc1EG047007 Secondary Identifier:  ? PAC:27461178
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047007 0.5kb upstream 0.5kb upstream 3567 true scaffold_2: 35950995-35954561 Theobroma cacao
Thecc1EG047007 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35950995-35951494 Theobroma cacao
Thecc1EG047007 0.5kb downstream 0.5kb downstream 3567 true scaffold_2: 35951495-35955061 Theobroma cacao
Thecc1EG047007 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35954562-35955061 Theobroma cacao
Thecc1EG047007 1.0kb upstream 1.0kb upstream 4067 true scaffold_2: 35950495-35954561 Theobroma cacao
Thecc1EG047007 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35950495-35951494 Theobroma cacao
Thecc1EG047007 1.0kb downstream 1.0kb downstream 4067 true scaffold_2: 35951495-35955561 Theobroma cacao
Thecc1EG047007 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35954562-35955561 Theobroma cacao
Thecc1EG047007 2.0kb upstream 2.0kb upstream 5067 true scaffold_2: 35949495-35954561 Theobroma cacao
Thecc1EG047007 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35949495-35951494 Theobroma cacao
Thecc1EG047007 2.0kb downstream 2.0kb downstream 5067 true scaffold_2: 35951495-35956561 Theobroma cacao
Thecc1EG047007 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35954562-35956561 Theobroma cacao
Thecc1EG047007 5.0kb upstream 5.0kb upstream 8067 true scaffold_2: 35946495-35954561 Theobroma cacao
Thecc1EG047007 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35946495-35951494 Theobroma cacao
Thecc1EG047007 5.0kb downstream 5.0kb downstream 8067 true scaffold_2: 35951495-35959561 Theobroma cacao
Thecc1EG047007 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35954562-35959561 Theobroma cacao
Thecc1EG047007 10.0kb upstream 10.0kb upstream 13067 true scaffold_2: 35941495-35954561 Theobroma cacao
Thecc1EG047007 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35941495-35951494 Theobroma cacao
Thecc1EG047007 10.0kb downstream 10.0kb downstream 13067 true scaffold_2: 35951495-35964561 Theobroma cacao
Thecc1EG047007 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35954562-35964561 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain