Gene : Thecc1EG012172 T. cacao v1.1
Defline:  (1 of 1) PTHR10792//PTHR10792:SF8 - 60S RIBOSOMAL PROTEIN L24 // RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED Genomic Order:  197
Name:  ? Thecc1EG012172 Secondary Identifier:  ? PAC:27450286
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012172 0.5kb upstream 0.5kb upstream 2331 true scaffold_3: 1420942-1423272 Theobroma cacao
Thecc1EG012172 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1420942-1421441 Theobroma cacao
Thecc1EG012172 0.5kb downstream 0.5kb downstream 2331 true scaffold_3: 1421442-1423772 Theobroma cacao
Thecc1EG012172 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1423273-1423772 Theobroma cacao
Thecc1EG012172 1.0kb upstream 1.0kb upstream 2831 true scaffold_3: 1420442-1423272 Theobroma cacao
Thecc1EG012172 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1420442-1421441 Theobroma cacao
Thecc1EG012172 1.0kb downstream 1.0kb downstream 2831 true scaffold_3: 1421442-1424272 Theobroma cacao
Thecc1EG012172 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1423273-1424272 Theobroma cacao
Thecc1EG012172 2.0kb upstream 2.0kb upstream 3831 true scaffold_3: 1419442-1423272 Theobroma cacao
Thecc1EG012172 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1419442-1421441 Theobroma cacao
Thecc1EG012172 2.0kb downstream 2.0kb downstream 3831 true scaffold_3: 1421442-1425272 Theobroma cacao
Thecc1EG012172 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1423273-1425272 Theobroma cacao
Thecc1EG012172 5.0kb upstream 5.0kb upstream 6831 true scaffold_3: 1416442-1423272 Theobroma cacao
Thecc1EG012172 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1416442-1421441 Theobroma cacao
Thecc1EG012172 5.0kb downstream 5.0kb downstream 6831 true scaffold_3: 1421442-1428272 Theobroma cacao
Thecc1EG012172 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1423273-1428272 Theobroma cacao
Thecc1EG012172 10.0kb upstream 10.0kb upstream 11831 true scaffold_3: 1411442-1423272 Theobroma cacao
Thecc1EG012172 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1411442-1421441 Theobroma cacao
Thecc1EG012172 10.0kb downstream 10.0kb downstream 11831 true scaffold_3: 1421442-1433272 Theobroma cacao
Thecc1EG012172 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1423273-1433272 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838751 5264 Brassicales-Malvales View MSA
124344307 5266 SBM View MSA
124237224 5268 Malvidae View MSA
124060903 5270 Rosid View MSA
123737225 5271 Pentapetalae View MSA
122786716 5272 Eudicot View MSA
122045898 5273 Angiosperm View MSA
121346492 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain