Gene : Thecc1EG012152 T. cacao v1.1
Defline:  Embryo defective 2759 Genomic Order:  178
Name:  ? Thecc1EG012152 Secondary Identifier:  ? PAC:27450198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012152 0.5kb upstream 0.5kb upstream 4408 true scaffold_3: 1330097-1334504 Theobroma cacao
Thecc1EG012152 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1334005-1334504 Theobroma cacao
Thecc1EG012152 0.5kb downstream 0.5kb downstream 4408 true scaffold_3: 1329597-1334004 Theobroma cacao
Thecc1EG012152 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1329597-1330096 Theobroma cacao
Thecc1EG012152 1.0kb upstream 1.0kb upstream 4908 true scaffold_3: 1330097-1335004 Theobroma cacao
Thecc1EG012152 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1334005-1335004 Theobroma cacao
Thecc1EG012152 1.0kb downstream 1.0kb downstream 4908 true scaffold_3: 1329097-1334004 Theobroma cacao
Thecc1EG012152 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1329097-1330096 Theobroma cacao
Thecc1EG012152 2.0kb upstream 2.0kb upstream 5908 true scaffold_3: 1330097-1336004 Theobroma cacao
Thecc1EG012152 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1334005-1336004 Theobroma cacao
Thecc1EG012152 2.0kb downstream 2.0kb downstream 5908 true scaffold_3: 1328097-1334004 Theobroma cacao
Thecc1EG012152 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1328097-1330096 Theobroma cacao
Thecc1EG012152 5.0kb upstream 5.0kb upstream 8908 true scaffold_3: 1330097-1339004 Theobroma cacao
Thecc1EG012152 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1334005-1339004 Theobroma cacao
Thecc1EG012152 5.0kb downstream 5.0kb downstream 8908 true scaffold_3: 1325097-1334004 Theobroma cacao
Thecc1EG012152 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1325097-1330096 Theobroma cacao
Thecc1EG012152 10.0kb upstream 10.0kb upstream 13908 true scaffold_3: 1330097-1344004 Theobroma cacao
Thecc1EG012152 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1334005-1344004 Theobroma cacao
Thecc1EG012152 10.0kb downstream 10.0kb downstream 13908 true scaffold_3: 1320097-1334004 Theobroma cacao
Thecc1EG012152 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1320097-1330096 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791743 5273 Angiosperm View MSA
123833247 5264 Brassicales-Malvales View MSA
124340097 5266 SBM View MSA
124253934 5268 Malvidae View MSA
124062295 5270 Rosid View MSA
123738445 5271 Pentapetalae View MSA
122788758 5272 Eudicot View MSA
121349367 5274 Embryophyte View MSA
123381288 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain