Gene : Thecc1EG012100 T. cacao v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF73 - GLUTAREDOXIN // GLUTAREDOXIN-C1 Genomic Order:  143
Name:  ? Thecc1EG012100 Secondary Identifier:  ? PAC:27451379
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao THIOREDOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012100 0.5kb upstream 0.5kb upstream 2415 true scaffold_3: 947383-949797 Theobroma cacao
Thecc1EG012100 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 949298-949797 Theobroma cacao
Thecc1EG012100 0.5kb downstream 0.5kb downstream 2415 true scaffold_3: 946883-949297 Theobroma cacao
Thecc1EG012100 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 946883-947382 Theobroma cacao
Thecc1EG012100 1.0kb upstream 1.0kb upstream 2915 true scaffold_3: 947383-950297 Theobroma cacao
Thecc1EG012100 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 949298-950297 Theobroma cacao
Thecc1EG012100 1.0kb downstream 1.0kb downstream 2915 true scaffold_3: 946383-949297 Theobroma cacao
Thecc1EG012100 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 946383-947382 Theobroma cacao
Thecc1EG012100 2.0kb upstream 2.0kb upstream 3915 true scaffold_3: 947383-951297 Theobroma cacao
Thecc1EG012100 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 949298-951297 Theobroma cacao
Thecc1EG012100 2.0kb downstream 2.0kb downstream 3915 true scaffold_3: 945383-949297 Theobroma cacao
Thecc1EG012100 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 945383-947382 Theobroma cacao
Thecc1EG012100 5.0kb upstream 5.0kb upstream 6915 true scaffold_3: 947383-954297 Theobroma cacao
Thecc1EG012100 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 949298-954297 Theobroma cacao
Thecc1EG012100 5.0kb downstream 5.0kb downstream 6915 true scaffold_3: 942383-949297 Theobroma cacao
Thecc1EG012100 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 942383-947382 Theobroma cacao
Thecc1EG012100 10.0kb upstream 10.0kb upstream 11915 true scaffold_3: 947383-959297 Theobroma cacao
Thecc1EG012100 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 949298-959297 Theobroma cacao
Thecc1EG012100 10.0kb downstream 10.0kb downstream 11915 true scaffold_3: 937383-949297 Theobroma cacao
Thecc1EG012100 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 937383-947382 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840210 5264 Brassicales-Malvales View MSA
124341739 5266 SBM View MSA
124243445 5268 Malvidae View MSA
124060631 5270 Rosid View MSA
123740735 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain