Gene : Thecc1EG012059 T. cacao v1.1
Defline:  (1 of 3) PTHR11002//PTHR11002:SF18 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Genomic Order:  109
Name:  ? Thecc1EG012059 Secondary Identifier:  ? PAC:27449966
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CYANCAT-PWY Theobroma cacao pathologic  
Tcacao PWY-241 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  
Tcacao PWYQT-4429 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012059 0.5kb upstream 0.5kb upstream 3428 true scaffold_3: 681369-684796 Theobroma cacao
Thecc1EG012059 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 684297-684796 Theobroma cacao
Thecc1EG012059 0.5kb downstream 0.5kb downstream 3428 true scaffold_3: 680869-684296 Theobroma cacao
Thecc1EG012059 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 680869-681368 Theobroma cacao
Thecc1EG012059 1.0kb upstream 1.0kb upstream 3928 true scaffold_3: 681369-685296 Theobroma cacao
Thecc1EG012059 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 684297-685296 Theobroma cacao
Thecc1EG012059 1.0kb downstream 1.0kb downstream 3928 true scaffold_3: 680369-684296 Theobroma cacao
Thecc1EG012059 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 680369-681368 Theobroma cacao
Thecc1EG012059 2.0kb upstream 2.0kb upstream 4928 true scaffold_3: 681369-686296 Theobroma cacao
Thecc1EG012059 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 684297-686296 Theobroma cacao
Thecc1EG012059 2.0kb downstream 2.0kb downstream 4928 true scaffold_3: 679369-684296 Theobroma cacao
Thecc1EG012059 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 679369-681368 Theobroma cacao
Thecc1EG012059 5.0kb upstream 5.0kb upstream 7928 true scaffold_3: 681369-689296 Theobroma cacao
Thecc1EG012059 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 684297-689296 Theobroma cacao
Thecc1EG012059 5.0kb downstream 5.0kb downstream 7928 true scaffold_3: 676369-684296 Theobroma cacao
Thecc1EG012059 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 676369-681368 Theobroma cacao
Thecc1EG012059 10.0kb upstream 10.0kb upstream 12928 true scaffold_3: 681369-694296 Theobroma cacao
Thecc1EG012059 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 684297-694296 Theobroma cacao
Thecc1EG012059 10.0kb downstream 10.0kb downstream 12928 true scaffold_3: 671369-684296 Theobroma cacao
Thecc1EG012059 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 671369-681368 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841862 5264 Brassicales-Malvales View MSA
124347893 5266 SBM View MSA
124252877 5268 Malvidae View MSA
124069679 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain