Gene : Thecc1EG012063 T. cacao v1.1
Defline:  Polyprotein-like protein (29%U) Genomic Order:  113
Name:  ? Thecc1EG012063 Secondary Identifier:  ? PAC:27447192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012063 0.5kb upstream 0.5kb upstream 1871 true scaffold_3: 693640-695510 Theobroma cacao
Thecc1EG012063 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 693640-694139 Theobroma cacao
Thecc1EG012063 0.5kb downstream 0.5kb downstream 1871 true scaffold_3: 694140-696010 Theobroma cacao
Thecc1EG012063 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 695511-696010 Theobroma cacao
Thecc1EG012063 1.0kb upstream 1.0kb upstream 2371 true scaffold_3: 693140-695510 Theobroma cacao
Thecc1EG012063 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 693140-694139 Theobroma cacao
Thecc1EG012063 1.0kb downstream 1.0kb downstream 2371 true scaffold_3: 694140-696510 Theobroma cacao
Thecc1EG012063 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 695511-696510 Theobroma cacao
Thecc1EG012063 2.0kb upstream 2.0kb upstream 3371 true scaffold_3: 692140-695510 Theobroma cacao
Thecc1EG012063 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 692140-694139 Theobroma cacao
Thecc1EG012063 2.0kb downstream 2.0kb downstream 3371 true scaffold_3: 694140-697510 Theobroma cacao
Thecc1EG012063 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 695511-697510 Theobroma cacao
Thecc1EG012063 5.0kb upstream 5.0kb upstream 6371 true scaffold_3: 689140-695510 Theobroma cacao
Thecc1EG012063 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 689140-694139 Theobroma cacao
Thecc1EG012063 5.0kb downstream 5.0kb downstream 6371 true scaffold_3: 694140-700510 Theobroma cacao
Thecc1EG012063 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 695511-700510 Theobroma cacao
Thecc1EG012063 10.0kb upstream 10.0kb upstream 11371 true scaffold_3: 684140-695510 Theobroma cacao
Thecc1EG012063 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 684140-694139 Theobroma cacao
Thecc1EG012063 10.0kb downstream 10.0kb downstream 11371 true scaffold_3: 694140-705510 Theobroma cacao
Thecc1EG012063 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 695511-705510 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782046 5273 Angiosperm View MSA
123818014 5264 Brassicales-Malvales Singleton cluster - no MSA
124314341 5266 SBM Singleton cluster - no MSA
124249970 5268 Malvidae View MSA
123952448 5270 Rosid View MSA
123751673 5271 Pentapetalae View MSA
122774131 5272 Eudicot View MSA
121053589 5274 Embryophyte View MSA
123093606 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain