Gene : Thecc1EG012278 T. cacao v1.1
Defline:  (1 of 1) PTHR12121:SF41 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 Genomic Order:  285
Name:  ? Thecc1EG012278 Secondary Identifier:  ? PAC:27450615
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012278 0.5kb upstream 0.5kb upstream 6300 true scaffold_3: 1936463-1942762 Theobroma cacao
Thecc1EG012278 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1942263-1942762 Theobroma cacao
Thecc1EG012278 0.5kb downstream 0.5kb downstream 6300 true scaffold_3: 1935963-1942262 Theobroma cacao
Thecc1EG012278 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1935963-1936462 Theobroma cacao
Thecc1EG012278 1.0kb upstream 1.0kb upstream 6800 true scaffold_3: 1936463-1943262 Theobroma cacao
Thecc1EG012278 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1942263-1943262 Theobroma cacao
Thecc1EG012278 1.0kb downstream 1.0kb downstream 6800 true scaffold_3: 1935463-1942262 Theobroma cacao
Thecc1EG012278 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1935463-1936462 Theobroma cacao
Thecc1EG012278 2.0kb upstream 2.0kb upstream 7800 true scaffold_3: 1936463-1944262 Theobroma cacao
Thecc1EG012278 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1942263-1944262 Theobroma cacao
Thecc1EG012278 2.0kb downstream 2.0kb downstream 7800 true scaffold_3: 1934463-1942262 Theobroma cacao
Thecc1EG012278 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1934463-1936462 Theobroma cacao
Thecc1EG012278 5.0kb upstream 5.0kb upstream 10800 true scaffold_3: 1936463-1947262 Theobroma cacao
Thecc1EG012278 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1942263-1947262 Theobroma cacao
Thecc1EG012278 5.0kb downstream 5.0kb downstream 10800 true scaffold_3: 1931463-1942262 Theobroma cacao
Thecc1EG012278 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1931463-1936462 Theobroma cacao
Thecc1EG012278 10.0kb upstream 10.0kb upstream 15800 true scaffold_3: 1936463-1952262 Theobroma cacao
Thecc1EG012278 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1942263-1952262 Theobroma cacao
Thecc1EG012278 10.0kb downstream 10.0kb downstream 15800 true scaffold_3: 1926463-1942262 Theobroma cacao
Thecc1EG012278 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1926463-1936462 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831264 5264 Brassicales-Malvales View MSA
124336807 5266 SBM View MSA
124244277 5268 Malvidae View MSA
124063317 5270 Rosid View MSA
123750146 5271 Pentapetalae View MSA
122793805 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain