Gene : Thecc1EG012240 T. cacao v1.1
Defline:  (1 of 2) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H Genomic Order:  255
Name:  ? Thecc1EG012240 Secondary Identifier:  ? PAC:27448845
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012240 0.5kb upstream 0.5kb upstream 7197 true scaffold_3: 1723448-1730644 Theobroma cacao
Thecc1EG012240 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1723448-1723947 Theobroma cacao
Thecc1EG012240 0.5kb downstream 0.5kb downstream 7197 true scaffold_3: 1723948-1731144 Theobroma cacao
Thecc1EG012240 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1730645-1731144 Theobroma cacao
Thecc1EG012240 1.0kb upstream 1.0kb upstream 7697 true scaffold_3: 1722948-1730644 Theobroma cacao
Thecc1EG012240 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1722948-1723947 Theobroma cacao
Thecc1EG012240 1.0kb downstream 1.0kb downstream 7697 true scaffold_3: 1723948-1731644 Theobroma cacao
Thecc1EG012240 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1730645-1731644 Theobroma cacao
Thecc1EG012240 2.0kb upstream 2.0kb upstream 8697 true scaffold_3: 1721948-1730644 Theobroma cacao
Thecc1EG012240 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1721948-1723947 Theobroma cacao
Thecc1EG012240 2.0kb downstream 2.0kb downstream 8697 true scaffold_3: 1723948-1732644 Theobroma cacao
Thecc1EG012240 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1730645-1732644 Theobroma cacao
Thecc1EG012240 5.0kb upstream 5.0kb upstream 11697 true scaffold_3: 1718948-1730644 Theobroma cacao
Thecc1EG012240 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1718948-1723947 Theobroma cacao
Thecc1EG012240 5.0kb downstream 5.0kb downstream 11697 true scaffold_3: 1723948-1735644 Theobroma cacao
Thecc1EG012240 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1730645-1735644 Theobroma cacao
Thecc1EG012240 10.0kb upstream 10.0kb upstream 16697 true scaffold_3: 1713948-1730644 Theobroma cacao
Thecc1EG012240 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1713948-1723947 Theobroma cacao
Thecc1EG012240 10.0kb downstream 10.0kb downstream 16697 true scaffold_3: 1723948-1740644 Theobroma cacao
Thecc1EG012240 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1730645-1740644 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818315 5264 Brassicales-Malvales Singleton cluster - no MSA
124314631 5266 SBM Singleton cluster - no MSA
124163608 5268 Malvidae Singleton cluster - no MSA
123887434 5270 Rosid Singleton cluster - no MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain