Gene : Thecc1EG012213 T. cacao v1.1
Defline:  (1 of 8) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  230
Name:  ? Thecc1EG012213 Secondary Identifier:  ? PAC:27448505
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5080 Theobroma cacao pathologic  
Tcacao PWY-6433 Theobroma cacao pathologic  
Tcacao PWY-6598 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-7601 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7619 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012213 0.5kb upstream 0.5kb upstream 4095 true scaffold_3: 1593386-1597480 Theobroma cacao
Thecc1EG012213 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1593386-1593885 Theobroma cacao
Thecc1EG012213 0.5kb downstream 0.5kb downstream 4095 true scaffold_3: 1593886-1597980 Theobroma cacao
Thecc1EG012213 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1597481-1597980 Theobroma cacao
Thecc1EG012213 1.0kb upstream 1.0kb upstream 4595 true scaffold_3: 1592886-1597480 Theobroma cacao
Thecc1EG012213 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1592886-1593885 Theobroma cacao
Thecc1EG012213 1.0kb downstream 1.0kb downstream 4595 true scaffold_3: 1593886-1598480 Theobroma cacao
Thecc1EG012213 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1597481-1598480 Theobroma cacao
Thecc1EG012213 2.0kb upstream 2.0kb upstream 5595 true scaffold_3: 1591886-1597480 Theobroma cacao
Thecc1EG012213 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1591886-1593885 Theobroma cacao
Thecc1EG012213 2.0kb downstream 2.0kb downstream 5595 true scaffold_3: 1593886-1599480 Theobroma cacao
Thecc1EG012213 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1597481-1599480 Theobroma cacao
Thecc1EG012213 5.0kb upstream 5.0kb upstream 8595 true scaffold_3: 1588886-1597480 Theobroma cacao
Thecc1EG012213 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1588886-1593885 Theobroma cacao
Thecc1EG012213 5.0kb downstream 5.0kb downstream 8595 true scaffold_3: 1593886-1602480 Theobroma cacao
Thecc1EG012213 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1597481-1602480 Theobroma cacao
Thecc1EG012213 10.0kb upstream 10.0kb upstream 13595 true scaffold_3: 1583886-1597480 Theobroma cacao
Thecc1EG012213 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1583886-1593885 Theobroma cacao
Thecc1EG012213 10.0kb downstream 10.0kb downstream 13595 true scaffold_3: 1593886-1607480 Theobroma cacao
Thecc1EG012213 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1597481-1607480 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834692 5264 Brassicales-Malvales View MSA
124337771 5266 SBM View MSA
124252937 5268 Malvidae View MSA
124064141 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain