Gene : Thecc1EG012212 T. cacao v1.1
Defline:  (1 of 1) PTHR15217//PTHR15217:SF0 - WILMS' TUMOR 1-ASSOCIATING PROTEIN // PRE-MRNA-SPLICING REGULATOR WTAP Genomic Order:  229
Name:  ? Thecc1EG012212 Secondary Identifier:  ? PAC:27449912
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012212 0.5kb upstream 0.5kb upstream 7205 true scaffold_3: 1583010-1590214 Theobroma cacao
Thecc1EG012212 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1589715-1590214 Theobroma cacao
Thecc1EG012212 0.5kb downstream 0.5kb downstream 7205 true scaffold_3: 1582510-1589714 Theobroma cacao
Thecc1EG012212 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1582510-1583009 Theobroma cacao
Thecc1EG012212 1.0kb upstream 1.0kb upstream 7705 true scaffold_3: 1583010-1590714 Theobroma cacao
Thecc1EG012212 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1589715-1590714 Theobroma cacao
Thecc1EG012212 1.0kb downstream 1.0kb downstream 7705 true scaffold_3: 1582010-1589714 Theobroma cacao
Thecc1EG012212 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1582010-1583009 Theobroma cacao
Thecc1EG012212 2.0kb upstream 2.0kb upstream 8705 true scaffold_3: 1583010-1591714 Theobroma cacao
Thecc1EG012212 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1589715-1591714 Theobroma cacao
Thecc1EG012212 2.0kb downstream 2.0kb downstream 8705 true scaffold_3: 1581010-1589714 Theobroma cacao
Thecc1EG012212 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1581010-1583009 Theobroma cacao
Thecc1EG012212 5.0kb upstream 5.0kb upstream 11705 true scaffold_3: 1583010-1594714 Theobroma cacao
Thecc1EG012212 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1589715-1594714 Theobroma cacao
Thecc1EG012212 5.0kb downstream 5.0kb downstream 11705 true scaffold_3: 1578010-1589714 Theobroma cacao
Thecc1EG012212 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1578010-1583009 Theobroma cacao
Thecc1EG012212 10.0kb upstream 10.0kb upstream 16705 true scaffold_3: 1583010-1599714 Theobroma cacao
Thecc1EG012212 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1589715-1599714 Theobroma cacao
Thecc1EG012212 10.0kb downstream 10.0kb downstream 16705 true scaffold_3: 1573010-1589714 Theobroma cacao
Thecc1EG012212 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1573010-1583009 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832646 5264 Brassicales-Malvales View MSA
124336474 5266 SBM View MSA
124244299 5268 Malvidae View MSA
124060684 5270 Rosid View MSA
123743181 5271 Pentapetalae View MSA
122795045 5272 Eudicot View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain