Gene : Thecc1EG012571 T. cacao v1.1
Defline:  (1 of 1) PTHR10641:SF538 - LD18233P Genomic Order:  467
Name:  ? Thecc1EG012571 Secondary Identifier:  ? PAC:27449537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012571 0.5kb upstream 0.5kb upstream 12194 true scaffold_3: 3936506-3948699 Theobroma cacao
Thecc1EG012571 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3936506-3937005 Theobroma cacao
Thecc1EG012571 0.5kb downstream 0.5kb downstream 12194 true scaffold_3: 3937006-3949199 Theobroma cacao
Thecc1EG012571 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3948700-3949199 Theobroma cacao
Thecc1EG012571 1.0kb upstream 1.0kb upstream 12694 true scaffold_3: 3936006-3948699 Theobroma cacao
Thecc1EG012571 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3936006-3937005 Theobroma cacao
Thecc1EG012571 1.0kb downstream 1.0kb downstream 12694 true scaffold_3: 3937006-3949699 Theobroma cacao
Thecc1EG012571 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3948700-3949699 Theobroma cacao
Thecc1EG012571 2.0kb upstream 2.0kb upstream 13694 true scaffold_3: 3935006-3948699 Theobroma cacao
Thecc1EG012571 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3935006-3937005 Theobroma cacao
Thecc1EG012571 2.0kb downstream 2.0kb downstream 13694 true scaffold_3: 3937006-3950699 Theobroma cacao
Thecc1EG012571 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3948700-3950699 Theobroma cacao
Thecc1EG012571 5.0kb upstream 5.0kb upstream 16694 true scaffold_3: 3932006-3948699 Theobroma cacao
Thecc1EG012571 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3932006-3937005 Theobroma cacao
Thecc1EG012571 5.0kb downstream 5.0kb downstream 16694 true scaffold_3: 3937006-3953699 Theobroma cacao
Thecc1EG012571 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3948700-3953699 Theobroma cacao
Thecc1EG012571 10.0kb upstream 10.0kb upstream 21694 true scaffold_3: 3927006-3948699 Theobroma cacao
Thecc1EG012571 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3927006-3937005 Theobroma cacao
Thecc1EG012571 10.0kb downstream 10.0kb downstream 21694 true scaffold_3: 3937006-3958699 Theobroma cacao
Thecc1EG012571 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3948700-3958699 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026520 5273 Angiosperm View MSA
123839377 5264 Brassicales-Malvales View MSA
124347843 5266 SBM View MSA
124243788 5268 Malvidae View MSA
124050779 5270 Rosid View MSA
123747940 5271 Pentapetalae View MSA
122796074 5272 Eudicot View MSA
123429079 5275 Viridiplantae View MSA
121348308 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain