Gene : Thecc1EG012569 T. cacao v1.1
Defline:  (1 of 1) PTHR11081//PTHR11081:SF27 - XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY // 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  465
Name:  ? Thecc1EG012569 Secondary Identifier:  ? PAC:27451171
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012569 0.5kb upstream 0.5kb upstream 8157 true scaffold_3: 3908136-3916292 Theobroma cacao
Thecc1EG012569 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3915793-3916292 Theobroma cacao
Thecc1EG012569 0.5kb downstream 0.5kb downstream 8157 true scaffold_3: 3907636-3915792 Theobroma cacao
Thecc1EG012569 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3907636-3908135 Theobroma cacao
Thecc1EG012569 1.0kb upstream 1.0kb upstream 8657 true scaffold_3: 3908136-3916792 Theobroma cacao
Thecc1EG012569 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3915793-3916792 Theobroma cacao
Thecc1EG012569 1.0kb downstream 1.0kb downstream 8657 true scaffold_3: 3907136-3915792 Theobroma cacao
Thecc1EG012569 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3907136-3908135 Theobroma cacao
Thecc1EG012569 2.0kb upstream 2.0kb upstream 9657 true scaffold_3: 3908136-3917792 Theobroma cacao
Thecc1EG012569 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3915793-3917792 Theobroma cacao
Thecc1EG012569 2.0kb downstream 2.0kb downstream 9657 true scaffold_3: 3906136-3915792 Theobroma cacao
Thecc1EG012569 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3906136-3908135 Theobroma cacao
Thecc1EG012569 5.0kb upstream 5.0kb upstream 12657 true scaffold_3: 3908136-3920792 Theobroma cacao
Thecc1EG012569 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3915793-3920792 Theobroma cacao
Thecc1EG012569 5.0kb downstream 5.0kb downstream 12657 true scaffold_3: 3903136-3915792 Theobroma cacao
Thecc1EG012569 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3903136-3908135 Theobroma cacao
Thecc1EG012569 10.0kb upstream 10.0kb upstream 17657 true scaffold_3: 3908136-3925792 Theobroma cacao
Thecc1EG012569 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3915793-3925792 Theobroma cacao
Thecc1EG012569 10.0kb downstream 10.0kb downstream 17657 true scaffold_3: 3898136-3915792 Theobroma cacao
Thecc1EG012569 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3898136-3908135 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026411 5273 Angiosperm View MSA
123832006 5264 Brassicales-Malvales View MSA
124346210 5266 SBM View MSA
124242168 5268 Malvidae View MSA
124066271 5270 Rosid View MSA
123736682 5271 Pentapetalae View MSA
122787637 5272 Eudicot View MSA
121349640 5274 Embryophyte View MSA
123426218 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain