Gene : Thecc1EG012527 T. cacao v1.1

Defline:  (1 of 1) 3.6.4.9 - Chaperonin ATPase / Chaperonin Genomic Order:  441
Name:  ? Thecc1EG012527 Secondary Identifier:  ? PAC:27449258

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012527 0.5kb upstream 0.5kb upstream 3718 true scaffold_3: 3576919-3580636 Theobroma cacao
Thecc1EG012527 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3580137-3580636 Theobroma cacao
Thecc1EG012527 0.5kb downstream 0.5kb downstream 3718 true scaffold_3: 3576419-3580136 Theobroma cacao
Thecc1EG012527 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3576419-3576918 Theobroma cacao
Thecc1EG012527 1.0kb upstream 1.0kb upstream 4218 true scaffold_3: 3576919-3581136 Theobroma cacao
Thecc1EG012527 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3580137-3581136 Theobroma cacao
Thecc1EG012527 1.0kb downstream 1.0kb downstream 4218 true scaffold_3: 3575919-3580136 Theobroma cacao
Thecc1EG012527 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3575919-3576918 Theobroma cacao
Thecc1EG012527 2.0kb upstream 2.0kb upstream 5218 true scaffold_3: 3576919-3582136 Theobroma cacao
Thecc1EG012527 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3580137-3582136 Theobroma cacao
Thecc1EG012527 2.0kb downstream 2.0kb downstream 5218 true scaffold_3: 3574919-3580136 Theobroma cacao
Thecc1EG012527 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3574919-3576918 Theobroma cacao
Thecc1EG012527 5.0kb upstream 5.0kb upstream 8218 true scaffold_3: 3576919-3585136 Theobroma cacao
Thecc1EG012527 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3580137-3585136 Theobroma cacao
Thecc1EG012527 5.0kb downstream 5.0kb downstream 8218 true scaffold_3: 3571919-3580136 Theobroma cacao
Thecc1EG012527 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3571919-3576918 Theobroma cacao
Thecc1EG012527 10.0kb upstream 10.0kb upstream 13218 true scaffold_3: 3576919-3590136 Theobroma cacao
Thecc1EG012527 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3580137-3590136 Theobroma cacao
Thecc1EG012527 10.0kb downstream 10.0kb downstream 13218 true scaffold_3: 3566919-3580136 Theobroma cacao
Thecc1EG012527 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3566919-3576918 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041248 5273 Angiosperm View MSA
123830659 5264 Brassicales-Malvales View MSA
124343091 5266 SBM View MSA
124242404 5268 Malvidae View MSA
124061732 5270 Rosid View MSA
123744760 5271 Pentapetalae View MSA
122793416 5272 Eudicot View MSA
121345664 5274 Embryophyte View MSA
123424288 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain