Gene : Thecc1EG012902 T. cacao v1.1
Defline:  (1 of 1) PTHR15454:SF7 - SERINE/THREONINE-PROTEIN KINASE 11-INTERACTING PROTEIN Genomic Order:  590
Name:  ? Thecc1EG012902 Secondary Identifier:  ? PAC:27447949
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012902 0.5kb upstream 0.5kb upstream 12016 true scaffold_3: 7289181-7301196 Theobroma cacao
Thecc1EG012902 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7300697-7301196 Theobroma cacao
Thecc1EG012902 0.5kb downstream 0.5kb downstream 12016 true scaffold_3: 7288681-7300696 Theobroma cacao
Thecc1EG012902 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7288681-7289180 Theobroma cacao
Thecc1EG012902 1.0kb upstream 1.0kb upstream 12516 true scaffold_3: 7289181-7301696 Theobroma cacao
Thecc1EG012902 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7300697-7301696 Theobroma cacao
Thecc1EG012902 1.0kb downstream 1.0kb downstream 12516 true scaffold_3: 7288181-7300696 Theobroma cacao
Thecc1EG012902 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7288181-7289180 Theobroma cacao
Thecc1EG012902 2.0kb upstream 2.0kb upstream 13516 true scaffold_3: 7289181-7302696 Theobroma cacao
Thecc1EG012902 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7300697-7302696 Theobroma cacao
Thecc1EG012902 2.0kb downstream 2.0kb downstream 13516 true scaffold_3: 7287181-7300696 Theobroma cacao
Thecc1EG012902 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7287181-7289180 Theobroma cacao
Thecc1EG012902 5.0kb upstream 5.0kb upstream 16516 true scaffold_3: 7289181-7305696 Theobroma cacao
Thecc1EG012902 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7300697-7305696 Theobroma cacao
Thecc1EG012902 5.0kb downstream 5.0kb downstream 16516 true scaffold_3: 7284181-7300696 Theobroma cacao
Thecc1EG012902 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7284181-7289180 Theobroma cacao
Thecc1EG012902 10.0kb upstream 10.0kb upstream 21516 true scaffold_3: 7289181-7310696 Theobroma cacao
Thecc1EG012902 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7300697-7310696 Theobroma cacao
Thecc1EG012902 10.0kb downstream 10.0kb downstream 21516 true scaffold_3: 7279181-7300696 Theobroma cacao
Thecc1EG012902 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7279181-7289180 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836421 5264 Brassicales-Malvales View MSA
124337466 5266 SBM View MSA
124240168 5268 Malvidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain