Gene : Thecc1EG012747 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  537
Name:  ? Thecc1EG012747 Secondary Identifier:  ? PAC:27448321
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012747 0.5kb upstream 0.5kb upstream 11855 true scaffold_3: 5691946-5703800 Theobroma cacao
Thecc1EG012747 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5703301-5703800 Theobroma cacao
Thecc1EG012747 0.5kb downstream 0.5kb downstream 11855 true scaffold_3: 5691446-5703300 Theobroma cacao
Thecc1EG012747 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5691446-5691945 Theobroma cacao
Thecc1EG012747 1.0kb upstream 1.0kb upstream 12355 true scaffold_3: 5691946-5704300 Theobroma cacao
Thecc1EG012747 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5703301-5704300 Theobroma cacao
Thecc1EG012747 1.0kb downstream 1.0kb downstream 12355 true scaffold_3: 5690946-5703300 Theobroma cacao
Thecc1EG012747 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5690946-5691945 Theobroma cacao
Thecc1EG012747 2.0kb upstream 2.0kb upstream 13355 true scaffold_3: 5691946-5705300 Theobroma cacao
Thecc1EG012747 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5703301-5705300 Theobroma cacao
Thecc1EG012747 2.0kb downstream 2.0kb downstream 13355 true scaffold_3: 5689946-5703300 Theobroma cacao
Thecc1EG012747 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5689946-5691945 Theobroma cacao
Thecc1EG012747 5.0kb upstream 5.0kb upstream 16355 true scaffold_3: 5691946-5708300 Theobroma cacao
Thecc1EG012747 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5703301-5708300 Theobroma cacao
Thecc1EG012747 5.0kb downstream 5.0kb downstream 16355 true scaffold_3: 5686946-5703300 Theobroma cacao
Thecc1EG012747 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5686946-5691945 Theobroma cacao
Thecc1EG012747 10.0kb upstream 10.0kb upstream 21355 true scaffold_3: 5691946-5713300 Theobroma cacao
Thecc1EG012747 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5703301-5713300 Theobroma cacao
Thecc1EG012747 10.0kb downstream 10.0kb downstream 21355 true scaffold_3: 5681946-5703300 Theobroma cacao
Thecc1EG012747 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5681946-5691945 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833308 5264 Brassicales-Malvales View MSA
124339952 5266 SBM View MSA
124237059 5268 Malvidae View MSA
124068854 5270 Rosid View MSA
123739048 5271 Pentapetalae View MSA
122788284 5272 Eudicot View MSA
122041778 5273 Angiosperm View MSA
121309888 5274 Embryophyte View MSA
123347524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain