Gene : Thecc1EG013025 T. cacao v1.1
Defline:  (1 of 1) PF02065 - Melibiase (Melibiase) Genomic Order:  638
Name:  ? Thecc1EG013025 Secondary Identifier:  ? PAC:27449150
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1301 Theobroma cacao pathologic  
Tcacao PWY-6527 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013025 0.5kb upstream 0.5kb upstream 6697 true scaffold_3: 8491052-8497748 Theobroma cacao
Thecc1EG013025 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8497249-8497748 Theobroma cacao
Thecc1EG013025 0.5kb downstream 0.5kb downstream 6697 true scaffold_3: 8490552-8497248 Theobroma cacao
Thecc1EG013025 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8490552-8491051 Theobroma cacao
Thecc1EG013025 1.0kb upstream 1.0kb upstream 7197 true scaffold_3: 8491052-8498248 Theobroma cacao
Thecc1EG013025 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8497249-8498248 Theobroma cacao
Thecc1EG013025 1.0kb downstream 1.0kb downstream 7197 true scaffold_3: 8490052-8497248 Theobroma cacao
Thecc1EG013025 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8490052-8491051 Theobroma cacao
Thecc1EG013025 2.0kb upstream 2.0kb upstream 8197 true scaffold_3: 8491052-8499248 Theobroma cacao
Thecc1EG013025 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8497249-8499248 Theobroma cacao
Thecc1EG013025 2.0kb downstream 2.0kb downstream 8197 true scaffold_3: 8489052-8497248 Theobroma cacao
Thecc1EG013025 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8489052-8491051 Theobroma cacao
Thecc1EG013025 5.0kb upstream 5.0kb upstream 11197 true scaffold_3: 8491052-8502248 Theobroma cacao
Thecc1EG013025 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8497249-8502248 Theobroma cacao
Thecc1EG013025 5.0kb downstream 5.0kb downstream 11197 true scaffold_3: 8486052-8497248 Theobroma cacao
Thecc1EG013025 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8486052-8491051 Theobroma cacao
Thecc1EG013025 10.0kb upstream 10.0kb upstream 16197 true scaffold_3: 8491052-8507248 Theobroma cacao
Thecc1EG013025 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8497249-8507248 Theobroma cacao
Thecc1EG013025 10.0kb downstream 10.0kb downstream 16197 true scaffold_3: 8481052-8497248 Theobroma cacao
Thecc1EG013025 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8481052-8491051 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818370 5264 Brassicales-Malvales Singleton cluster - no MSA
124349365 5266 SBM View MSA
124247152 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain