Gene : Thecc1EG013007 T. cacao v1.1

Defline:  (1 of 1) PTHR10217//PTHR10217:SF514 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  632
Name:  ? Thecc1EG013007 Secondary Identifier:  ? PAC:27450200

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013007 0.5kb upstream 0.5kb upstream 21777 true scaffold_3: 8319845-8341621 Theobroma cacao
Thecc1EG013007 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8319845-8320344 Theobroma cacao
Thecc1EG013007 0.5kb downstream 0.5kb downstream 21777 true scaffold_3: 8320345-8342121 Theobroma cacao
Thecc1EG013007 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8341622-8342121 Theobroma cacao
Thecc1EG013007 1.0kb upstream 1.0kb upstream 22277 true scaffold_3: 8319345-8341621 Theobroma cacao
Thecc1EG013007 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8319345-8320344 Theobroma cacao
Thecc1EG013007 1.0kb downstream 1.0kb downstream 22277 true scaffold_3: 8320345-8342621 Theobroma cacao
Thecc1EG013007 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8341622-8342621 Theobroma cacao
Thecc1EG013007 2.0kb upstream 2.0kb upstream 23277 true scaffold_3: 8318345-8341621 Theobroma cacao
Thecc1EG013007 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8318345-8320344 Theobroma cacao
Thecc1EG013007 2.0kb downstream 2.0kb downstream 23277 true scaffold_3: 8320345-8343621 Theobroma cacao
Thecc1EG013007 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8341622-8343621 Theobroma cacao
Thecc1EG013007 5.0kb upstream 5.0kb upstream 26277 true scaffold_3: 8315345-8341621 Theobroma cacao
Thecc1EG013007 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8315345-8320344 Theobroma cacao
Thecc1EG013007 5.0kb downstream 5.0kb downstream 26277 true scaffold_3: 8320345-8346621 Theobroma cacao
Thecc1EG013007 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8341622-8346621 Theobroma cacao
Thecc1EG013007 10.0kb upstream 10.0kb upstream 31277 true scaffold_3: 8310345-8341621 Theobroma cacao
Thecc1EG013007 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8310345-8320344 Theobroma cacao
Thecc1EG013007 10.0kb downstream 10.0kb downstream 31277 true scaffold_3: 8320345-8351621 Theobroma cacao
Thecc1EG013007 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8341622-8351621 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825159 5264 Brassicales-Malvales View MSA
124320482 5266 SBM View MSA
124248330 5268 Malvidae View MSA
124071952 5270 Rosid View MSA
123747890 5271 Pentapetalae View MSA
122792503 5272 Eudicot View MSA
122045299 5273 Angiosperm View MSA
121310431 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain