Gene : Thecc1EG012973 T. cacao v1.1
Defline:  (1 of 4) K01915 - glutamine synthetase (glnA, GLUL) Genomic Order:  622
Name:  ? Thecc1EG012973 Secondary Identifier:  ? PAC:27448148
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLNSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3282 Theobroma cacao pathologic  
Tcacao PWY-381 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  
Tcacao PWY-6963 Theobroma cacao pathologic  
Tcacao PWY-6964 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012973 0.5kb upstream 0.5kb upstream 3915 true scaffold_3: 7985217-7989131 Theobroma cacao
Thecc1EG012973 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7988632-7989131 Theobroma cacao
Thecc1EG012973 0.5kb downstream 0.5kb downstream 3915 true scaffold_3: 7984717-7988631 Theobroma cacao
Thecc1EG012973 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7984717-7985216 Theobroma cacao
Thecc1EG012973 1.0kb upstream 1.0kb upstream 4415 true scaffold_3: 7985217-7989631 Theobroma cacao
Thecc1EG012973 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7988632-7989631 Theobroma cacao
Thecc1EG012973 1.0kb downstream 1.0kb downstream 4415 true scaffold_3: 7984217-7988631 Theobroma cacao
Thecc1EG012973 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7984217-7985216 Theobroma cacao
Thecc1EG012973 2.0kb upstream 2.0kb upstream 5415 true scaffold_3: 7985217-7990631 Theobroma cacao
Thecc1EG012973 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7988632-7990631 Theobroma cacao
Thecc1EG012973 2.0kb downstream 2.0kb downstream 5415 true scaffold_3: 7983217-7988631 Theobroma cacao
Thecc1EG012973 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7983217-7985216 Theobroma cacao
Thecc1EG012973 5.0kb upstream 5.0kb upstream 8415 true scaffold_3: 7985217-7993631 Theobroma cacao
Thecc1EG012973 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7988632-7993631 Theobroma cacao
Thecc1EG012973 5.0kb downstream 5.0kb downstream 8415 true scaffold_3: 7980217-7988631 Theobroma cacao
Thecc1EG012973 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7980217-7985216 Theobroma cacao
Thecc1EG012973 10.0kb upstream 10.0kb upstream 13415 true scaffold_3: 7985217-7998631 Theobroma cacao
Thecc1EG012973 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7988632-7998631 Theobroma cacao
Thecc1EG012973 10.0kb downstream 10.0kb downstream 13415 true scaffold_3: 7975217-7988631 Theobroma cacao
Thecc1EG012973 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7975217-7985216 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842193 5264 Brassicales-Malvales View MSA
124323311 5266 SBM View MSA
124248212 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain