Gene : Thecc1EG013886 T. cacao v1.1
Defline:  (1 of 2) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  848
Name:  ? Thecc1EG013886 Secondary Identifier:  ? PAC:27451327
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY66-422 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013886 0.5kb upstream 0.5kb upstream 6095 true scaffold_3: 18137646-18143740 Theobroma cacao
Thecc1EG013886 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 18137646-18138145 Theobroma cacao
Thecc1EG013886 0.5kb downstream 0.5kb downstream 6095 true scaffold_3: 18138146-18144240 Theobroma cacao
Thecc1EG013886 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 18143741-18144240 Theobroma cacao
Thecc1EG013886 1.0kb upstream 1.0kb upstream 6595 true scaffold_3: 18137146-18143740 Theobroma cacao
Thecc1EG013886 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 18137146-18138145 Theobroma cacao
Thecc1EG013886 1.0kb downstream 1.0kb downstream 6595 true scaffold_3: 18138146-18144740 Theobroma cacao
Thecc1EG013886 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 18143741-18144740 Theobroma cacao
Thecc1EG013886 2.0kb upstream 2.0kb upstream 7595 true scaffold_3: 18136146-18143740 Theobroma cacao
Thecc1EG013886 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 18136146-18138145 Theobroma cacao
Thecc1EG013886 2.0kb downstream 2.0kb downstream 7595 true scaffold_3: 18138146-18145740 Theobroma cacao
Thecc1EG013886 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 18143741-18145740 Theobroma cacao
Thecc1EG013886 5.0kb upstream 5.0kb upstream 10595 true scaffold_3: 18133146-18143740 Theobroma cacao
Thecc1EG013886 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 18133146-18138145 Theobroma cacao
Thecc1EG013886 5.0kb downstream 5.0kb downstream 10595 true scaffold_3: 18138146-18148740 Theobroma cacao
Thecc1EG013886 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 18143741-18148740 Theobroma cacao
Thecc1EG013886 10.0kb upstream 10.0kb upstream 15595 true scaffold_3: 18128146-18143740 Theobroma cacao
Thecc1EG013886 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 18128146-18138145 Theobroma cacao
Thecc1EG013886 10.0kb downstream 10.0kb downstream 15595 true scaffold_3: 18138146-18153740 Theobroma cacao
Thecc1EG013886 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 18143741-18153740 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830104 5264 Brassicales-Malvales View MSA
124340129 5266 SBM View MSA
124241568 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain