Gene : Thecc1EG013775 T. cacao v1.1
Defline:  (1 of 1) PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Genomic Order:  789
Name:  ? Thecc1EG013775 Secondary Identifier:  ? PAC:27449039
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013775 0.5kb upstream 0.5kb upstream 11264 true scaffold_3: 17032187-17043450 Theobroma cacao
Thecc1EG013775 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 17042951-17043450 Theobroma cacao
Thecc1EG013775 0.5kb downstream 0.5kb downstream 11264 true scaffold_3: 17031687-17042950 Theobroma cacao
Thecc1EG013775 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 17031687-17032186 Theobroma cacao
Thecc1EG013775 1.0kb upstream 1.0kb upstream 11764 true scaffold_3: 17032187-17043950 Theobroma cacao
Thecc1EG013775 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 17042951-17043950 Theobroma cacao
Thecc1EG013775 1.0kb downstream 1.0kb downstream 11764 true scaffold_3: 17031187-17042950 Theobroma cacao
Thecc1EG013775 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 17031187-17032186 Theobroma cacao
Thecc1EG013775 2.0kb upstream 2.0kb upstream 12764 true scaffold_3: 17032187-17044950 Theobroma cacao
Thecc1EG013775 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 17042951-17044950 Theobroma cacao
Thecc1EG013775 2.0kb downstream 2.0kb downstream 12764 true scaffold_3: 17030187-17042950 Theobroma cacao
Thecc1EG013775 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 17030187-17032186 Theobroma cacao
Thecc1EG013775 5.0kb upstream 5.0kb upstream 15764 true scaffold_3: 17032187-17047950 Theobroma cacao
Thecc1EG013775 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 17042951-17047950 Theobroma cacao
Thecc1EG013775 5.0kb downstream 5.0kb downstream 15764 true scaffold_3: 17027187-17042950 Theobroma cacao
Thecc1EG013775 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 17027187-17032186 Theobroma cacao
Thecc1EG013775 10.0kb upstream 10.0kb upstream 20764 true scaffold_3: 17032187-17052950 Theobroma cacao
Thecc1EG013775 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 17042951-17052950 Theobroma cacao
Thecc1EG013775 10.0kb downstream 10.0kb downstream 20764 true scaffold_3: 17022187-17042950 Theobroma cacao
Thecc1EG013775 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 17022187-17032186 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841591 5264 Brassicales-Malvales View MSA
124340866 5266 SBM View MSA
124252136 5268 Malvidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain