Gene : Thecc1EG013776 T. cacao v1.1
Defline:  (1 of 467) PF13041 - PPR repeat family (PPR_2) Genomic Order:  790
Name:  ? Thecc1EG013776 Secondary Identifier:  ? PAC:27450081
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013776 0.5kb upstream 0.5kb upstream 7264 true scaffold_3: 17043113-17050376 Theobroma cacao
Thecc1EG013776 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 17049877-17050376 Theobroma cacao
Thecc1EG013776 0.5kb downstream 0.5kb downstream 7264 true scaffold_3: 17042613-17049876 Theobroma cacao
Thecc1EG013776 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 17042613-17043112 Theobroma cacao
Thecc1EG013776 1.0kb upstream 1.0kb upstream 7764 true scaffold_3: 17043113-17050876 Theobroma cacao
Thecc1EG013776 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 17049877-17050876 Theobroma cacao
Thecc1EG013776 1.0kb downstream 1.0kb downstream 7764 true scaffold_3: 17042113-17049876 Theobroma cacao
Thecc1EG013776 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 17042113-17043112 Theobroma cacao
Thecc1EG013776 2.0kb upstream 2.0kb upstream 8764 true scaffold_3: 17043113-17051876 Theobroma cacao
Thecc1EG013776 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 17049877-17051876 Theobroma cacao
Thecc1EG013776 2.0kb downstream 2.0kb downstream 8764 true scaffold_3: 17041113-17049876 Theobroma cacao
Thecc1EG013776 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 17041113-17043112 Theobroma cacao
Thecc1EG013776 5.0kb upstream 5.0kb upstream 11764 true scaffold_3: 17043113-17054876 Theobroma cacao
Thecc1EG013776 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 17049877-17054876 Theobroma cacao
Thecc1EG013776 5.0kb downstream 5.0kb downstream 11764 true scaffold_3: 17038113-17049876 Theobroma cacao
Thecc1EG013776 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 17038113-17043112 Theobroma cacao
Thecc1EG013776 10.0kb upstream 10.0kb upstream 16764 true scaffold_3: 17043113-17059876 Theobroma cacao
Thecc1EG013776 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 17049877-17059876 Theobroma cacao
Thecc1EG013776 10.0kb downstream 10.0kb downstream 16764 true scaffold_3: 17033113-17049876 Theobroma cacao
Thecc1EG013776 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 17033113-17043112 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827812 5264 Brassicales-Malvales View MSA
124350713 5266 SBM View MSA
124239510 5268 Malvidae View MSA
124066157 5270 Rosid View MSA
123739123 5271 Pentapetalae View MSA
122794218 5272 Eudicot View MSA
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain