Gene : Thecc1EG014111 T. cacao v1.1
Defline:  (1 of 1) PTHR23327//PTHR23327:SF9 - RING FINGER PROTEIN 127 // ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN Genomic Order:  970
Name:  ? Thecc1EG014111 Secondary Identifier:  ? PAC:27451263
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014111 0.5kb upstream 0.5kb upstream 9549 true scaffold_3: 19935629-19945177 Theobroma cacao
Thecc1EG014111 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19944678-19945177 Theobroma cacao
Thecc1EG014111 0.5kb downstream 0.5kb downstream 9549 true scaffold_3: 19935129-19944677 Theobroma cacao
Thecc1EG014111 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19935129-19935628 Theobroma cacao
Thecc1EG014111 1.0kb upstream 1.0kb upstream 10049 true scaffold_3: 19935629-19945677 Theobroma cacao
Thecc1EG014111 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19944678-19945677 Theobroma cacao
Thecc1EG014111 1.0kb downstream 1.0kb downstream 10049 true scaffold_3: 19934629-19944677 Theobroma cacao
Thecc1EG014111 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19934629-19935628 Theobroma cacao
Thecc1EG014111 2.0kb upstream 2.0kb upstream 11049 true scaffold_3: 19935629-19946677 Theobroma cacao
Thecc1EG014111 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19944678-19946677 Theobroma cacao
Thecc1EG014111 2.0kb downstream 2.0kb downstream 11049 true scaffold_3: 19933629-19944677 Theobroma cacao
Thecc1EG014111 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19933629-19935628 Theobroma cacao
Thecc1EG014111 5.0kb upstream 5.0kb upstream 14049 true scaffold_3: 19935629-19949677 Theobroma cacao
Thecc1EG014111 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19944678-19949677 Theobroma cacao
Thecc1EG014111 5.0kb downstream 5.0kb downstream 14049 true scaffold_3: 19930629-19944677 Theobroma cacao
Thecc1EG014111 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19930629-19935628 Theobroma cacao
Thecc1EG014111 10.0kb upstream 10.0kb upstream 19049 true scaffold_3: 19935629-19954677 Theobroma cacao
Thecc1EG014111 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19944678-19954677 Theobroma cacao
Thecc1EG014111 10.0kb downstream 10.0kb downstream 19049 true scaffold_3: 19925629-19944677 Theobroma cacao
Thecc1EG014111 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19925629-19935628 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840530 5264 Brassicales-Malvales View MSA
124345117 5266 SBM View MSA
124241219 5268 Malvidae View MSA
124060590 5270 Rosid View MSA
123742205 5271 Pentapetalae View MSA
122791083 5272 Eudicot View MSA
122048007 5273 Angiosperm View MSA
121347127 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain