Gene : Thecc1EG014107 T. cacao v1.1
Defline:  (1 of 1) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  966
Name:  ? Thecc1EG014107 Secondary Identifier:  ? PAC:27447110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5936 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014107 0.5kb upstream 0.5kb upstream 7571 true scaffold_3: 19925044-19932614 Theobroma cacao
Thecc1EG014107 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19925044-19925543 Theobroma cacao
Thecc1EG014107 0.5kb downstream 0.5kb downstream 7571 true scaffold_3: 19925544-19933114 Theobroma cacao
Thecc1EG014107 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19932615-19933114 Theobroma cacao
Thecc1EG014107 1.0kb upstream 1.0kb upstream 8071 true scaffold_3: 19924544-19932614 Theobroma cacao
Thecc1EG014107 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19924544-19925543 Theobroma cacao
Thecc1EG014107 1.0kb downstream 1.0kb downstream 8071 true scaffold_3: 19925544-19933614 Theobroma cacao
Thecc1EG014107 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19932615-19933614 Theobroma cacao
Thecc1EG014107 2.0kb upstream 2.0kb upstream 9071 true scaffold_3: 19923544-19932614 Theobroma cacao
Thecc1EG014107 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19923544-19925543 Theobroma cacao
Thecc1EG014107 2.0kb downstream 2.0kb downstream 9071 true scaffold_3: 19925544-19934614 Theobroma cacao
Thecc1EG014107 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19932615-19934614 Theobroma cacao
Thecc1EG014107 5.0kb upstream 5.0kb upstream 12071 true scaffold_3: 19920544-19932614 Theobroma cacao
Thecc1EG014107 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19920544-19925543 Theobroma cacao
Thecc1EG014107 5.0kb downstream 5.0kb downstream 12071 true scaffold_3: 19925544-19937614 Theobroma cacao
Thecc1EG014107 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19932615-19937614 Theobroma cacao
Thecc1EG014107 10.0kb upstream 10.0kb upstream 17071 true scaffold_3: 19915544-19932614 Theobroma cacao
Thecc1EG014107 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19915544-19925543 Theobroma cacao
Thecc1EG014107 10.0kb downstream 10.0kb downstream 17071 true scaffold_3: 19925544-19942614 Theobroma cacao
Thecc1EG014107 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19932615-19942614 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839780 5264 Brassicales-Malvales View MSA
124338371 5266 SBM View MSA
124251626 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain