Gene : Thecc1EG014052 T. cacao v1.1
Defline:  (1 of 27) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  936
Name:  ? Thecc1EG014052 Secondary Identifier:  ? PAC:27450226
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014052 0.5kb upstream 0.5kb upstream 5701 true scaffold_3: 19475552-19481252 Theobroma cacao
Thecc1EG014052 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19480753-19481252 Theobroma cacao
Thecc1EG014052 0.5kb downstream 0.5kb downstream 5701 true scaffold_3: 19475052-19480752 Theobroma cacao
Thecc1EG014052 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19475052-19475551 Theobroma cacao
Thecc1EG014052 1.0kb upstream 1.0kb upstream 6201 true scaffold_3: 19475552-19481752 Theobroma cacao
Thecc1EG014052 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19480753-19481752 Theobroma cacao
Thecc1EG014052 1.0kb downstream 1.0kb downstream 6201 true scaffold_3: 19474552-19480752 Theobroma cacao
Thecc1EG014052 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19474552-19475551 Theobroma cacao
Thecc1EG014052 2.0kb upstream 2.0kb upstream 7201 true scaffold_3: 19475552-19482752 Theobroma cacao
Thecc1EG014052 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19480753-19482752 Theobroma cacao
Thecc1EG014052 2.0kb downstream 2.0kb downstream 7201 true scaffold_3: 19473552-19480752 Theobroma cacao
Thecc1EG014052 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19473552-19475551 Theobroma cacao
Thecc1EG014052 5.0kb upstream 5.0kb upstream 10201 true scaffold_3: 19475552-19485752 Theobroma cacao
Thecc1EG014052 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19480753-19485752 Theobroma cacao
Thecc1EG014052 5.0kb downstream 5.0kb downstream 10201 true scaffold_3: 19470552-19480752 Theobroma cacao
Thecc1EG014052 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19470552-19475551 Theobroma cacao
Thecc1EG014052 10.0kb upstream 10.0kb upstream 15201 true scaffold_3: 19475552-19490752 Theobroma cacao
Thecc1EG014052 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19480753-19490752 Theobroma cacao
Thecc1EG014052 10.0kb downstream 10.0kb downstream 15201 true scaffold_3: 19465552-19480752 Theobroma cacao
Thecc1EG014052 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19465552-19475551 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838910 5264 Brassicales-Malvales View MSA
124350197 5266 SBM View MSA
124248581 5268 Malvidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain