Gene : Thecc1EG014027 T. cacao v1.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  921
Name:  ? Thecc1EG014027 Secondary Identifier:  ? PAC:27447421
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014027 0.5kb upstream 0.5kb upstream 3506 true scaffold_3: 19324547-19328052 Theobroma cacao
Thecc1EG014027 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19324547-19325046 Theobroma cacao
Thecc1EG014027 0.5kb downstream 0.5kb downstream 3506 true scaffold_3: 19325047-19328552 Theobroma cacao
Thecc1EG014027 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19328053-19328552 Theobroma cacao
Thecc1EG014027 1.0kb upstream 1.0kb upstream 4006 true scaffold_3: 19324047-19328052 Theobroma cacao
Thecc1EG014027 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19324047-19325046 Theobroma cacao
Thecc1EG014027 1.0kb downstream 1.0kb downstream 4006 true scaffold_3: 19325047-19329052 Theobroma cacao
Thecc1EG014027 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19328053-19329052 Theobroma cacao
Thecc1EG014027 2.0kb upstream 2.0kb upstream 5006 true scaffold_3: 19323047-19328052 Theobroma cacao
Thecc1EG014027 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19323047-19325046 Theobroma cacao
Thecc1EG014027 2.0kb downstream 2.0kb downstream 5006 true scaffold_3: 19325047-19330052 Theobroma cacao
Thecc1EG014027 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19328053-19330052 Theobroma cacao
Thecc1EG014027 5.0kb upstream 5.0kb upstream 8006 true scaffold_3: 19320047-19328052 Theobroma cacao
Thecc1EG014027 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19320047-19325046 Theobroma cacao
Thecc1EG014027 5.0kb downstream 5.0kb downstream 8006 true scaffold_3: 19325047-19333052 Theobroma cacao
Thecc1EG014027 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19328053-19333052 Theobroma cacao
Thecc1EG014027 10.0kb upstream 10.0kb upstream 13006 true scaffold_3: 19315047-19328052 Theobroma cacao
Thecc1EG014027 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19315047-19325046 Theobroma cacao
Thecc1EG014027 10.0kb downstream 10.0kb downstream 13006 true scaffold_3: 19325047-19338052 Theobroma cacao
Thecc1EG014027 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19328053-19338052 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830982 5264 Brassicales-Malvales View MSA
124345476 5266 SBM View MSA
124253733 5268 Malvidae View MSA
124065806 5270 Rosid View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain