Gene : Thecc1EG014050 T. cacao v1.1
Defline:  (1 of 1) K08910 - light-harvesting complex I chlorophyll a/b binding protein 4 (LHCA4) Genomic Order:  934
Name:  ? Thecc1EG014050 Secondary Identifier:  ? PAC:27448159
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014050 0.5kb upstream 0.5kb upstream 1768 true scaffold_3: 19464160-19465927 Theobroma cacao
Thecc1EG014050 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19464160-19464659 Theobroma cacao
Thecc1EG014050 0.5kb downstream 0.5kb downstream 1768 true scaffold_3: 19464660-19466427 Theobroma cacao
Thecc1EG014050 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19465928-19466427 Theobroma cacao
Thecc1EG014050 1.0kb upstream 1.0kb upstream 2268 true scaffold_3: 19463660-19465927 Theobroma cacao
Thecc1EG014050 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19463660-19464659 Theobroma cacao
Thecc1EG014050 1.0kb downstream 1.0kb downstream 2268 true scaffold_3: 19464660-19466927 Theobroma cacao
Thecc1EG014050 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19465928-19466927 Theobroma cacao
Thecc1EG014050 2.0kb upstream 2.0kb upstream 3268 true scaffold_3: 19462660-19465927 Theobroma cacao
Thecc1EG014050 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19462660-19464659 Theobroma cacao
Thecc1EG014050 2.0kb downstream 2.0kb downstream 3268 true scaffold_3: 19464660-19467927 Theobroma cacao
Thecc1EG014050 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19465928-19467927 Theobroma cacao
Thecc1EG014050 5.0kb upstream 5.0kb upstream 6268 true scaffold_3: 19459660-19465927 Theobroma cacao
Thecc1EG014050 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19459660-19464659 Theobroma cacao
Thecc1EG014050 5.0kb downstream 5.0kb downstream 6268 true scaffold_3: 19464660-19470927 Theobroma cacao
Thecc1EG014050 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19465928-19470927 Theobroma cacao
Thecc1EG014050 10.0kb upstream 10.0kb upstream 11268 true scaffold_3: 19454660-19465927 Theobroma cacao
Thecc1EG014050 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19454660-19464659 Theobroma cacao
Thecc1EG014050 10.0kb downstream 10.0kb downstream 11268 true scaffold_3: 19464660-19475927 Theobroma cacao
Thecc1EG014050 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19465928-19475927 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834792 5264 Brassicales-Malvales View MSA
124341061 5266 SBM View MSA
124239114 5268 Malvidae View MSA
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain