Gene : Thecc1EG014018 T. cacao v1.1
Defline:  (1 of 1) PTHR11540//PTHR11540:SF29 - MALATE AND LACTATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  916
Name:  ? Thecc1EG014018 Secondary Identifier:  ? PAC:27447472
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014018 0.5kb upstream 0.5kb upstream 4038 true scaffold_3: 19288472-19292509 Theobroma cacao
Thecc1EG014018 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19292010-19292509 Theobroma cacao
Thecc1EG014018 0.5kb downstream 0.5kb downstream 4038 true scaffold_3: 19287972-19292009 Theobroma cacao
Thecc1EG014018 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19287972-19288471 Theobroma cacao
Thecc1EG014018 1.0kb upstream 1.0kb upstream 4538 true scaffold_3: 19288472-19293009 Theobroma cacao
Thecc1EG014018 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19292010-19293009 Theobroma cacao
Thecc1EG014018 1.0kb downstream 1.0kb downstream 4538 true scaffold_3: 19287472-19292009 Theobroma cacao
Thecc1EG014018 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19287472-19288471 Theobroma cacao
Thecc1EG014018 2.0kb upstream 2.0kb upstream 5538 true scaffold_3: 19288472-19294009 Theobroma cacao
Thecc1EG014018 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19292010-19294009 Theobroma cacao
Thecc1EG014018 2.0kb downstream 2.0kb downstream 5538 true scaffold_3: 19286472-19292009 Theobroma cacao
Thecc1EG014018 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19286472-19288471 Theobroma cacao
Thecc1EG014018 5.0kb upstream 5.0kb upstream 8538 true scaffold_3: 19288472-19297009 Theobroma cacao
Thecc1EG014018 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19292010-19297009 Theobroma cacao
Thecc1EG014018 5.0kb downstream 5.0kb downstream 8538 true scaffold_3: 19283472-19292009 Theobroma cacao
Thecc1EG014018 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19283472-19288471 Theobroma cacao
Thecc1EG014018 10.0kb upstream 10.0kb upstream 13538 true scaffold_3: 19288472-19302009 Theobroma cacao
Thecc1EG014018 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19292010-19302009 Theobroma cacao
Thecc1EG014018 10.0kb downstream 10.0kb downstream 13538 true scaffold_3: 19278472-19292009 Theobroma cacao
Thecc1EG014018 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19278472-19288471 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838139 5264 Brassicales-Malvales View MSA
124343979 5266 SBM View MSA
124242231 5268 Malvidae View MSA
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain