Gene : Thecc1EG013994 T. cacao v1.1
Defline:  Uncharacterized protein Genomic Order:  900
Name:  ? Thecc1EG013994 Secondary Identifier:  ? PAC:27450238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013994 0.5kb upstream 0.5kb upstream 6043 true scaffold_3: 19103158-19109200 Theobroma cacao
Thecc1EG013994 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19108701-19109200 Theobroma cacao
Thecc1EG013994 0.5kb downstream 0.5kb downstream 6043 true scaffold_3: 19102658-19108700 Theobroma cacao
Thecc1EG013994 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19102658-19103157 Theobroma cacao
Thecc1EG013994 1.0kb upstream 1.0kb upstream 6543 true scaffold_3: 19103158-19109700 Theobroma cacao
Thecc1EG013994 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19108701-19109700 Theobroma cacao
Thecc1EG013994 1.0kb downstream 1.0kb downstream 6543 true scaffold_3: 19102158-19108700 Theobroma cacao
Thecc1EG013994 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19102158-19103157 Theobroma cacao
Thecc1EG013994 2.0kb upstream 2.0kb upstream 7543 true scaffold_3: 19103158-19110700 Theobroma cacao
Thecc1EG013994 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19108701-19110700 Theobroma cacao
Thecc1EG013994 2.0kb downstream 2.0kb downstream 7543 true scaffold_3: 19101158-19108700 Theobroma cacao
Thecc1EG013994 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19101158-19103157 Theobroma cacao
Thecc1EG013994 5.0kb upstream 5.0kb upstream 10543 true scaffold_3: 19103158-19113700 Theobroma cacao
Thecc1EG013994 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19108701-19113700 Theobroma cacao
Thecc1EG013994 5.0kb downstream 5.0kb downstream 10543 true scaffold_3: 19098158-19108700 Theobroma cacao
Thecc1EG013994 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19098158-19103157 Theobroma cacao
Thecc1EG013994 10.0kb upstream 10.0kb upstream 15543 true scaffold_3: 19103158-19118700 Theobroma cacao
Thecc1EG013994 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19108701-19118700 Theobroma cacao
Thecc1EG013994 10.0kb downstream 10.0kb downstream 15543 true scaffold_3: 19093158-19108700 Theobroma cacao
Thecc1EG013994 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19093158-19103157 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121521065 5273 Angiosperm Singleton cluster - no MSA
123818571 5264 Brassicales-Malvales Singleton cluster - no MSA
124314878 5266 SBM Singleton cluster - no MSA
124163837 5268 Malvidae Singleton cluster - no MSA
123887648 5270 Rosid Singleton cluster - no MSA
123470110 5271 Pentapetalae Singleton cluster - no MSA
122505405 5272 Eudicot Singleton cluster - no MSA
120793869 5274 Embryophyte Singleton cluster - no MSA
122835471 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain