Gene : Thecc1EG013996 T. cacao v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF99 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  902
Name:  ? Thecc1EG013996 Secondary Identifier:  ? PAC:27450504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013996 0.5kb upstream 0.5kb upstream 5270 true scaffold_3: 19126429-19131698 Theobroma cacao
Thecc1EG013996 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19126429-19126928 Theobroma cacao
Thecc1EG013996 0.5kb downstream 0.5kb downstream 5270 true scaffold_3: 19126929-19132198 Theobroma cacao
Thecc1EG013996 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19131699-19132198 Theobroma cacao
Thecc1EG013996 1.0kb upstream 1.0kb upstream 5770 true scaffold_3: 19125929-19131698 Theobroma cacao
Thecc1EG013996 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19125929-19126928 Theobroma cacao
Thecc1EG013996 1.0kb downstream 1.0kb downstream 5770 true scaffold_3: 19126929-19132698 Theobroma cacao
Thecc1EG013996 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19131699-19132698 Theobroma cacao
Thecc1EG013996 2.0kb upstream 2.0kb upstream 6770 true scaffold_3: 19124929-19131698 Theobroma cacao
Thecc1EG013996 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19124929-19126928 Theobroma cacao
Thecc1EG013996 2.0kb downstream 2.0kb downstream 6770 true scaffold_3: 19126929-19133698 Theobroma cacao
Thecc1EG013996 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19131699-19133698 Theobroma cacao
Thecc1EG013996 5.0kb upstream 5.0kb upstream 9770 true scaffold_3: 19121929-19131698 Theobroma cacao
Thecc1EG013996 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19121929-19126928 Theobroma cacao
Thecc1EG013996 5.0kb downstream 5.0kb downstream 9770 true scaffold_3: 19126929-19136698 Theobroma cacao
Thecc1EG013996 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19131699-19136698 Theobroma cacao
Thecc1EG013996 10.0kb upstream 10.0kb upstream 14770 true scaffold_3: 19116929-19131698 Theobroma cacao
Thecc1EG013996 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19116929-19126928 Theobroma cacao
Thecc1EG013996 10.0kb downstream 10.0kb downstream 14770 true scaffold_3: 19126929-19141698 Theobroma cacao
Thecc1EG013996 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19131699-19141698 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827909 5264 Brassicales-Malvales View MSA
124337314 5266 SBM View MSA
124242834 5268 Malvidae View MSA
124068491 5270 Rosid View MSA
123736949 5271 Pentapetalae View MSA
122787546 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain