Gene : Thecc1EG014267 T. cacao v1.1
Defline:  (1 of 2) K04505 - presenilin 1 (PSEN1, PS1) Genomic Order:  1056
Name:  ? Thecc1EG014267 Secondary Identifier:  ? PAC:27449861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014267 0.5kb upstream 0.5kb upstream 3745 true scaffold_3: 21232987-21236731 Theobroma cacao
Thecc1EG014267 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 21236232-21236731 Theobroma cacao
Thecc1EG014267 0.5kb downstream 0.5kb downstream 3745 true scaffold_3: 21232487-21236231 Theobroma cacao
Thecc1EG014267 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 21232487-21232986 Theobroma cacao
Thecc1EG014267 1.0kb upstream 1.0kb upstream 4245 true scaffold_3: 21232987-21237231 Theobroma cacao
Thecc1EG014267 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 21236232-21237231 Theobroma cacao
Thecc1EG014267 1.0kb downstream 1.0kb downstream 4245 true scaffold_3: 21231987-21236231 Theobroma cacao
Thecc1EG014267 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 21231987-21232986 Theobroma cacao
Thecc1EG014267 2.0kb upstream 2.0kb upstream 5245 true scaffold_3: 21232987-21238231 Theobroma cacao
Thecc1EG014267 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 21236232-21238231 Theobroma cacao
Thecc1EG014267 2.0kb downstream 2.0kb downstream 5245 true scaffold_3: 21230987-21236231 Theobroma cacao
Thecc1EG014267 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 21230987-21232986 Theobroma cacao
Thecc1EG014267 5.0kb upstream 5.0kb upstream 8245 true scaffold_3: 21232987-21241231 Theobroma cacao
Thecc1EG014267 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 21236232-21241231 Theobroma cacao
Thecc1EG014267 5.0kb downstream 5.0kb downstream 8245 true scaffold_3: 21227987-21236231 Theobroma cacao
Thecc1EG014267 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 21227987-21232986 Theobroma cacao
Thecc1EG014267 10.0kb upstream 10.0kb upstream 13245 true scaffold_3: 21232987-21246231 Theobroma cacao
Thecc1EG014267 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 21236232-21246231 Theobroma cacao
Thecc1EG014267 10.0kb downstream 10.0kb downstream 13245 true scaffold_3: 21222987-21236231 Theobroma cacao
Thecc1EG014267 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 21222987-21232986 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829143 5264 Brassicales-Malvales View MSA
124321576 5266 SBM View MSA
124239111 5268 Malvidae View MSA
124063592 5270 Rosid View MSA
123748546 5271 Pentapetalae View MSA
122790840 5272 Eudicot View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain