Gene : Thecc1EG014256 T. cacao v1.1
Defline:  (1 of 1) PTHR10625//PTHR10625:SF102 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 10 Genomic Order:  1045
Name:  ? Thecc1EG014256 Secondary Identifier:  ? PAC:27449652
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014256 0.5kb upstream 0.5kb upstream 6044 true scaffold_3: 21172043-21178086 Theobroma cacao
Thecc1EG014256 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 21172043-21172542 Theobroma cacao
Thecc1EG014256 0.5kb downstream 0.5kb downstream 6044 true scaffold_3: 21172543-21178586 Theobroma cacao
Thecc1EG014256 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 21178087-21178586 Theobroma cacao
Thecc1EG014256 1.0kb upstream 1.0kb upstream 6544 true scaffold_3: 21171543-21178086 Theobroma cacao
Thecc1EG014256 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 21171543-21172542 Theobroma cacao
Thecc1EG014256 1.0kb downstream 1.0kb downstream 6544 true scaffold_3: 21172543-21179086 Theobroma cacao
Thecc1EG014256 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 21178087-21179086 Theobroma cacao
Thecc1EG014256 2.0kb upstream 2.0kb upstream 7544 true scaffold_3: 21170543-21178086 Theobroma cacao
Thecc1EG014256 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 21170543-21172542 Theobroma cacao
Thecc1EG014256 2.0kb downstream 2.0kb downstream 7544 true scaffold_3: 21172543-21180086 Theobroma cacao
Thecc1EG014256 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 21178087-21180086 Theobroma cacao
Thecc1EG014256 5.0kb upstream 5.0kb upstream 10544 true scaffold_3: 21167543-21178086 Theobroma cacao
Thecc1EG014256 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 21167543-21172542 Theobroma cacao
Thecc1EG014256 5.0kb downstream 5.0kb downstream 10544 true scaffold_3: 21172543-21183086 Theobroma cacao
Thecc1EG014256 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 21178087-21183086 Theobroma cacao
Thecc1EG014256 10.0kb upstream 10.0kb upstream 15544 true scaffold_3: 21162543-21178086 Theobroma cacao
Thecc1EG014256 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 21162543-21172542 Theobroma cacao
Thecc1EG014256 10.0kb downstream 10.0kb downstream 15544 true scaffold_3: 21172543-21188086 Theobroma cacao
Thecc1EG014256 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 21178087-21188086 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838303 5264 Brassicales-Malvales View MSA
124339544 5266 SBM View MSA
124251429 5268 Malvidae View MSA
124067905 5270 Rosid View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain