Gene : Thecc1EG014257 T. cacao v1.1

Defline:  (1 of 1) PTHR24078//PTHR24078:SF232 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HOMOLOG SUBFAMILY C MEMBER 21 Genomic Order:  1046
Name:  ? Thecc1EG014257 Secondary Identifier:  ? PAC:27449011

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014257 0.5kb upstream 0.5kb upstream 4027 true scaffold_3: 21177212-21181238 Theobroma cacao
Thecc1EG014257 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 21180739-21181238 Theobroma cacao
Thecc1EG014257 0.5kb downstream 0.5kb downstream 4027 true scaffold_3: 21176712-21180738 Theobroma cacao
Thecc1EG014257 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 21176712-21177211 Theobroma cacao
Thecc1EG014257 1.0kb upstream 1.0kb upstream 4527 true scaffold_3: 21177212-21181738 Theobroma cacao
Thecc1EG014257 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 21180739-21181738 Theobroma cacao
Thecc1EG014257 1.0kb downstream 1.0kb downstream 4527 true scaffold_3: 21176212-21180738 Theobroma cacao
Thecc1EG014257 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 21176212-21177211 Theobroma cacao
Thecc1EG014257 2.0kb upstream 2.0kb upstream 5527 true scaffold_3: 21177212-21182738 Theobroma cacao
Thecc1EG014257 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 21180739-21182738 Theobroma cacao
Thecc1EG014257 2.0kb downstream 2.0kb downstream 5527 true scaffold_3: 21175212-21180738 Theobroma cacao
Thecc1EG014257 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 21175212-21177211 Theobroma cacao
Thecc1EG014257 5.0kb upstream 5.0kb upstream 8527 true scaffold_3: 21177212-21185738 Theobroma cacao
Thecc1EG014257 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 21180739-21185738 Theobroma cacao
Thecc1EG014257 5.0kb downstream 5.0kb downstream 8527 true scaffold_3: 21172212-21180738 Theobroma cacao
Thecc1EG014257 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 21172212-21177211 Theobroma cacao
Thecc1EG014257 10.0kb upstream 10.0kb upstream 13527 true scaffold_3: 21177212-21190738 Theobroma cacao
Thecc1EG014257 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 21180739-21190738 Theobroma cacao
Thecc1EG014257 10.0kb downstream 10.0kb downstream 13527 true scaffold_3: 21167212-21180738 Theobroma cacao
Thecc1EG014257 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 21167212-21177211 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834753 5264 Brassicales-Malvales View MSA
124339669 5266 SBM View MSA
124243290 5268 Malvidae View MSA
124063309 5270 Rosid View MSA
123738580 5271 Pentapetalae View MSA
122787326 5272 Eudicot View MSA
122048991 5273 Angiosperm View MSA
123429114 5275 Viridiplantae View MSA
121346269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain