Gene : Thecc1EG014526 T. cacao v1.1

Defline:  (1 of 1) PTHR10173//PTHR10173:SF41 - METHIONINE SULFOXIDE REDUCTASE // SUBFAMILY NOT NAMED Genomic Order:  1225
Name:  ? Thecc1EG014526 Secondary Identifier:  ? PAC:27450128

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014526 0.5kb upstream 0.5kb upstream 1407 true scaffold_3: 22968040-22969446 Theobroma cacao
Thecc1EG014526 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22968040-22968539 Theobroma cacao
Thecc1EG014526 0.5kb downstream 0.5kb downstream 1407 true scaffold_3: 22968540-22969946 Theobroma cacao
Thecc1EG014526 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22969447-22969946 Theobroma cacao
Thecc1EG014526 1.0kb upstream 1.0kb upstream 1907 true scaffold_3: 22967540-22969446 Theobroma cacao
Thecc1EG014526 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22967540-22968539 Theobroma cacao
Thecc1EG014526 1.0kb downstream 1.0kb downstream 1907 true scaffold_3: 22968540-22970446 Theobroma cacao
Thecc1EG014526 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22969447-22970446 Theobroma cacao
Thecc1EG014526 2.0kb upstream 2.0kb upstream 2907 true scaffold_3: 22966540-22969446 Theobroma cacao
Thecc1EG014526 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22966540-22968539 Theobroma cacao
Thecc1EG014526 2.0kb downstream 2.0kb downstream 2907 true scaffold_3: 22968540-22971446 Theobroma cacao
Thecc1EG014526 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22969447-22971446 Theobroma cacao
Thecc1EG014526 5.0kb upstream 5.0kb upstream 5907 true scaffold_3: 22963540-22969446 Theobroma cacao
Thecc1EG014526 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22963540-22968539 Theobroma cacao
Thecc1EG014526 5.0kb downstream 5.0kb downstream 5907 true scaffold_3: 22968540-22974446 Theobroma cacao
Thecc1EG014526 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22969447-22974446 Theobroma cacao
Thecc1EG014526 10.0kb upstream 10.0kb upstream 10907 true scaffold_3: 22958540-22969446 Theobroma cacao
Thecc1EG014526 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22958540-22968539 Theobroma cacao
Thecc1EG014526 10.0kb downstream 10.0kb downstream 10907 true scaffold_3: 22968540-22979446 Theobroma cacao
Thecc1EG014526 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22969447-22979446 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824963 5264 Brassicales-Malvales View MSA
124348831 5266 SBM View MSA
124246149 5268 Malvidae View MSA
124070160 5270 Rosid View MSA
123742522 5271 Pentapetalae View MSA
122794262 5272 Eudicot View MSA
122050305 5273 Angiosperm View MSA
121349628 5274 Embryophyte View MSA
123428576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain