Gene : Thecc1EG014477 T. cacao v1.1

Defline:  (1 of 1) PTHR11064//PTHR11064:SF35 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // PROTEIN DR1 HOMOLOG Genomic Order:  1182
Name:  ? Thecc1EG014477 Secondary Identifier:  ? PAC:27447958

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014477 0.5kb upstream 0.5kb upstream 5475 true scaffold_3: 22652524-22657998 Theobroma cacao
Thecc1EG014477 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22652524-22653023 Theobroma cacao
Thecc1EG014477 0.5kb downstream 0.5kb downstream 5475 true scaffold_3: 22653024-22658498 Theobroma cacao
Thecc1EG014477 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22657999-22658498 Theobroma cacao
Thecc1EG014477 1.0kb upstream 1.0kb upstream 5975 true scaffold_3: 22652024-22657998 Theobroma cacao
Thecc1EG014477 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22652024-22653023 Theobroma cacao
Thecc1EG014477 1.0kb downstream 1.0kb downstream 5975 true scaffold_3: 22653024-22658998 Theobroma cacao
Thecc1EG014477 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22657999-22658998 Theobroma cacao
Thecc1EG014477 2.0kb upstream 2.0kb upstream 6975 true scaffold_3: 22651024-22657998 Theobroma cacao
Thecc1EG014477 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22651024-22653023 Theobroma cacao
Thecc1EG014477 2.0kb downstream 2.0kb downstream 6975 true scaffold_3: 22653024-22659998 Theobroma cacao
Thecc1EG014477 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22657999-22659998 Theobroma cacao
Thecc1EG014477 5.0kb upstream 5.0kb upstream 9975 true scaffold_3: 22648024-22657998 Theobroma cacao
Thecc1EG014477 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22648024-22653023 Theobroma cacao
Thecc1EG014477 5.0kb downstream 5.0kb downstream 9975 true scaffold_3: 22653024-22662998 Theobroma cacao
Thecc1EG014477 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22657999-22662998 Theobroma cacao
Thecc1EG014477 10.0kb upstream 10.0kb upstream 14975 true scaffold_3: 22643024-22657998 Theobroma cacao
Thecc1EG014477 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22643024-22653023 Theobroma cacao
Thecc1EG014477 10.0kb downstream 10.0kb downstream 14975 true scaffold_3: 22653024-22667998 Theobroma cacao
Thecc1EG014477 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22657999-22667998 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839724 5264 Brassicales-Malvales View MSA
124337372 5266 SBM View MSA
124243742 5268 Malvidae View MSA
124066760 5270 Rosid View MSA
123746342 5271 Pentapetalae View MSA
122796163 5272 Eudicot View MSA
122043494 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121351075 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain