Gene : Thecc1EG014439 T. cacao v1.1

Defline:  (1 of 3) K04710 - ceramide synthetase (CERS) Genomic Order:  1155
Name:  ? Thecc1EG014439 Secondary Identifier:  ? PAC:27451377

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014439 0.5kb upstream 0.5kb upstream 12706 true scaffold_3: 22454240-22466945 Theobroma cacao
Thecc1EG014439 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22454240-22454739 Theobroma cacao
Thecc1EG014439 0.5kb downstream 0.5kb downstream 12706 true scaffold_3: 22454740-22467445 Theobroma cacao
Thecc1EG014439 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22466946-22467445 Theobroma cacao
Thecc1EG014439 1.0kb upstream 1.0kb upstream 13206 true scaffold_3: 22453740-22466945 Theobroma cacao
Thecc1EG014439 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22453740-22454739 Theobroma cacao
Thecc1EG014439 1.0kb downstream 1.0kb downstream 13206 true scaffold_3: 22454740-22467945 Theobroma cacao
Thecc1EG014439 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22466946-22467945 Theobroma cacao
Thecc1EG014439 2.0kb upstream 2.0kb upstream 14206 true scaffold_3: 22452740-22466945 Theobroma cacao
Thecc1EG014439 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22452740-22454739 Theobroma cacao
Thecc1EG014439 2.0kb downstream 2.0kb downstream 14206 true scaffold_3: 22454740-22468945 Theobroma cacao
Thecc1EG014439 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22466946-22468945 Theobroma cacao
Thecc1EG014439 5.0kb upstream 5.0kb upstream 17206 true scaffold_3: 22449740-22466945 Theobroma cacao
Thecc1EG014439 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22449740-22454739 Theobroma cacao
Thecc1EG014439 5.0kb downstream 5.0kb downstream 17206 true scaffold_3: 22454740-22471945 Theobroma cacao
Thecc1EG014439 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22466946-22471945 Theobroma cacao
Thecc1EG014439 10.0kb upstream 10.0kb upstream 22206 true scaffold_3: 22444740-22466945 Theobroma cacao
Thecc1EG014439 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22444740-22454739 Theobroma cacao
Thecc1EG014439 10.0kb downstream 10.0kb downstream 22206 true scaffold_3: 22454740-22476945 Theobroma cacao
Thecc1EG014439 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22466946-22476945 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824078 5264 Brassicales-Malvales View MSA
124347984 5266 SBM View MSA
124254290 5268 Malvidae View MSA
124065846 5270 Rosid View MSA
123739424 5271 Pentapetalae View MSA
122796577 5272 Eudicot View MSA
122046862 5273 Angiosperm View MSA
121348140 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain