Gene : Thecc1EG014441 T. cacao v1.1

Defline:  (1 of 2) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED Genomic Order:  1157
Name:  ? Thecc1EG014441 Secondary Identifier:  ? PAC:27448022

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014441 0.5kb upstream 0.5kb upstream 3177 true scaffold_3: 22466622-22469798 Theobroma cacao
Thecc1EG014441 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22469299-22469798 Theobroma cacao
Thecc1EG014441 0.5kb downstream 0.5kb downstream 3177 true scaffold_3: 22466122-22469298 Theobroma cacao
Thecc1EG014441 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22466122-22466621 Theobroma cacao
Thecc1EG014441 1.0kb upstream 1.0kb upstream 3677 true scaffold_3: 22466622-22470298 Theobroma cacao
Thecc1EG014441 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22469299-22470298 Theobroma cacao
Thecc1EG014441 1.0kb downstream 1.0kb downstream 3677 true scaffold_3: 22465622-22469298 Theobroma cacao
Thecc1EG014441 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22465622-22466621 Theobroma cacao
Thecc1EG014441 2.0kb upstream 2.0kb upstream 4677 true scaffold_3: 22466622-22471298 Theobroma cacao
Thecc1EG014441 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22469299-22471298 Theobroma cacao
Thecc1EG014441 2.0kb downstream 2.0kb downstream 4677 true scaffold_3: 22464622-22469298 Theobroma cacao
Thecc1EG014441 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22464622-22466621 Theobroma cacao
Thecc1EG014441 5.0kb upstream 5.0kb upstream 7677 true scaffold_3: 22466622-22474298 Theobroma cacao
Thecc1EG014441 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22469299-22474298 Theobroma cacao
Thecc1EG014441 5.0kb downstream 5.0kb downstream 7677 true scaffold_3: 22461622-22469298 Theobroma cacao
Thecc1EG014441 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22461622-22466621 Theobroma cacao
Thecc1EG014441 10.0kb upstream 10.0kb upstream 12677 true scaffold_3: 22466622-22479298 Theobroma cacao
Thecc1EG014441 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22469299-22479298 Theobroma cacao
Thecc1EG014441 10.0kb downstream 10.0kb downstream 12677 true scaffold_3: 22456622-22469298 Theobroma cacao
Thecc1EG014441 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22456622-22466621 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826381 5264 Brassicales-Malvales View MSA
124349677 5266 SBM View MSA
124247032 5268 Malvidae View MSA
124065921 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain