Gene : Thecc1EG014701 T. cacao v1.1
Defline:  (1 of 1) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  1376
Name:  ? Thecc1EG014701 Secondary Identifier:  ? PAC:27448768
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5188 Theobroma cacao pathologic  
Tcacao PWY-5918 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014701 0.5kb upstream 0.5kb upstream 3630 true scaffold_3: 23944534-23948163 Theobroma cacao
Thecc1EG014701 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23944534-23945033 Theobroma cacao
Thecc1EG014701 0.5kb downstream 0.5kb downstream 3630 true scaffold_3: 23945034-23948663 Theobroma cacao
Thecc1EG014701 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23948164-23948663 Theobroma cacao
Thecc1EG014701 1.0kb upstream 1.0kb upstream 4130 true scaffold_3: 23944034-23948163 Theobroma cacao
Thecc1EG014701 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23944034-23945033 Theobroma cacao
Thecc1EG014701 1.0kb downstream 1.0kb downstream 4130 true scaffold_3: 23945034-23949163 Theobroma cacao
Thecc1EG014701 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23948164-23949163 Theobroma cacao
Thecc1EG014701 2.0kb upstream 2.0kb upstream 5130 true scaffold_3: 23943034-23948163 Theobroma cacao
Thecc1EG014701 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23943034-23945033 Theobroma cacao
Thecc1EG014701 2.0kb downstream 2.0kb downstream 5130 true scaffold_3: 23945034-23950163 Theobroma cacao
Thecc1EG014701 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23948164-23950163 Theobroma cacao
Thecc1EG014701 5.0kb upstream 5.0kb upstream 8130 true scaffold_3: 23940034-23948163 Theobroma cacao
Thecc1EG014701 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23940034-23945033 Theobroma cacao
Thecc1EG014701 5.0kb downstream 5.0kb downstream 8130 true scaffold_3: 23945034-23953163 Theobroma cacao
Thecc1EG014701 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23948164-23953163 Theobroma cacao
Thecc1EG014701 10.0kb upstream 10.0kb upstream 13130 true scaffold_3: 23935034-23948163 Theobroma cacao
Thecc1EG014701 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23935034-23945033 Theobroma cacao
Thecc1EG014701 10.0kb downstream 10.0kb downstream 13130 true scaffold_3: 23945034-23958163 Theobroma cacao
Thecc1EG014701 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23948164-23958163 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838013 5264 Brassicales-Malvales View MSA
124339096 5266 SBM View MSA
124239994 5268 Malvidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain