Gene : Thecc1EG014640 T. cacao v1.1

Defline:  (1 of 1) K07178 - RIO kinase 1 (RIOK1) Genomic Order:  1321
Name:  ? Thecc1EG014640 Secondary Identifier:  ? PAC:27450316

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014640 0.5kb upstream 0.5kb upstream 5104 true scaffold_3: 23625467-23630570 Theobroma cacao
Thecc1EG014640 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23630071-23630570 Theobroma cacao
Thecc1EG014640 0.5kb downstream 0.5kb downstream 5104 true scaffold_3: 23624967-23630070 Theobroma cacao
Thecc1EG014640 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23624967-23625466 Theobroma cacao
Thecc1EG014640 1.0kb upstream 1.0kb upstream 5604 true scaffold_3: 23625467-23631070 Theobroma cacao
Thecc1EG014640 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23630071-23631070 Theobroma cacao
Thecc1EG014640 1.0kb downstream 1.0kb downstream 5604 true scaffold_3: 23624467-23630070 Theobroma cacao
Thecc1EG014640 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23624467-23625466 Theobroma cacao
Thecc1EG014640 2.0kb upstream 2.0kb upstream 6604 true scaffold_3: 23625467-23632070 Theobroma cacao
Thecc1EG014640 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23630071-23632070 Theobroma cacao
Thecc1EG014640 2.0kb downstream 2.0kb downstream 6604 true scaffold_3: 23623467-23630070 Theobroma cacao
Thecc1EG014640 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23623467-23625466 Theobroma cacao
Thecc1EG014640 5.0kb upstream 5.0kb upstream 9604 true scaffold_3: 23625467-23635070 Theobroma cacao
Thecc1EG014640 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23630071-23635070 Theobroma cacao
Thecc1EG014640 5.0kb downstream 5.0kb downstream 9604 true scaffold_3: 23620467-23630070 Theobroma cacao
Thecc1EG014640 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23620467-23625466 Theobroma cacao
Thecc1EG014640 10.0kb upstream 10.0kb upstream 14604 true scaffold_3: 23625467-23640070 Theobroma cacao
Thecc1EG014640 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23630071-23640070 Theobroma cacao
Thecc1EG014640 10.0kb downstream 10.0kb downstream 14604 true scaffold_3: 23615467-23630070 Theobroma cacao
Thecc1EG014640 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23615467-23625466 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836903 5264 Brassicales-Malvales View MSA
124322223 5266 SBM View MSA
124246706 5268 Malvidae View MSA
124062198 5270 Rosid View MSA
123740947 5271 Pentapetalae View MSA
122786592 5272 Eudicot View MSA
122044010 5273 Angiosperm View MSA
121344530 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain