Gene : Thecc1EG014628 T. cacao v1.1
Defline:  (1 of 1) PF02037//PF10172 - SAP domain (SAP) // Det1 complexing ubiquitin ligase (DDA1) Genomic Order:  1311
Name:  ? Thecc1EG014628 Secondary Identifier:  ? PAC:27449053
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014628 0.5kb upstream 0.5kb upstream 5336 true scaffold_3: 23575659-23580994 Theobroma cacao
Thecc1EG014628 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23580495-23580994 Theobroma cacao
Thecc1EG014628 0.5kb downstream 0.5kb downstream 5336 true scaffold_3: 23575159-23580494 Theobroma cacao
Thecc1EG014628 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23575159-23575658 Theobroma cacao
Thecc1EG014628 1.0kb upstream 1.0kb upstream 5836 true scaffold_3: 23575659-23581494 Theobroma cacao
Thecc1EG014628 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23580495-23581494 Theobroma cacao
Thecc1EG014628 1.0kb downstream 1.0kb downstream 5836 true scaffold_3: 23574659-23580494 Theobroma cacao
Thecc1EG014628 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23574659-23575658 Theobroma cacao
Thecc1EG014628 2.0kb upstream 2.0kb upstream 6836 true scaffold_3: 23575659-23582494 Theobroma cacao
Thecc1EG014628 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23580495-23582494 Theobroma cacao
Thecc1EG014628 2.0kb downstream 2.0kb downstream 6836 true scaffold_3: 23573659-23580494 Theobroma cacao
Thecc1EG014628 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23573659-23575658 Theobroma cacao
Thecc1EG014628 5.0kb upstream 5.0kb upstream 9836 true scaffold_3: 23575659-23585494 Theobroma cacao
Thecc1EG014628 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23580495-23585494 Theobroma cacao
Thecc1EG014628 5.0kb downstream 5.0kb downstream 9836 true scaffold_3: 23570659-23580494 Theobroma cacao
Thecc1EG014628 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23570659-23575658 Theobroma cacao
Thecc1EG014628 10.0kb upstream 10.0kb upstream 14836 true scaffold_3: 23575659-23590494 Theobroma cacao
Thecc1EG014628 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23580495-23590494 Theobroma cacao
Thecc1EG014628 10.0kb downstream 10.0kb downstream 14836 true scaffold_3: 23565659-23580494 Theobroma cacao
Thecc1EG014628 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23565659-23575658 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837282 5264 Brassicales-Malvales View MSA
124342151 5266 SBM View MSA
124243029 5268 Malvidae View MSA
124066068 5270 Rosid View MSA
123746630 5271 Pentapetalae View MSA
122792914 5272 Eudicot View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain