Gene : Thecc1EG014608 T. cacao v1.1
Defline:  (1 of 1) 6.3.4.5 - Argininosuccinate synthase / Citrulline--aspartate ligase Genomic Order:  1297
Name:  ? Thecc1EG014608 Secondary Identifier:  ? PAC:27447507
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARGSYNBSUB-PWY Theobroma cacao pathologic  
Tcacao ARGSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-4984 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014608 0.5kb upstream 0.5kb upstream 5111 true scaffold_3: 23464811-23469921 Theobroma cacao
Thecc1EG014608 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23469422-23469921 Theobroma cacao
Thecc1EG014608 0.5kb downstream 0.5kb downstream 5111 true scaffold_3: 23464311-23469421 Theobroma cacao
Thecc1EG014608 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23464311-23464810 Theobroma cacao
Thecc1EG014608 1.0kb upstream 1.0kb upstream 5611 true scaffold_3: 23464811-23470421 Theobroma cacao
Thecc1EG014608 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23469422-23470421 Theobroma cacao
Thecc1EG014608 1.0kb downstream 1.0kb downstream 5611 true scaffold_3: 23463811-23469421 Theobroma cacao
Thecc1EG014608 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23463811-23464810 Theobroma cacao
Thecc1EG014608 2.0kb upstream 2.0kb upstream 6611 true scaffold_3: 23464811-23471421 Theobroma cacao
Thecc1EG014608 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23469422-23471421 Theobroma cacao
Thecc1EG014608 2.0kb downstream 2.0kb downstream 6611 true scaffold_3: 23462811-23469421 Theobroma cacao
Thecc1EG014608 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23462811-23464810 Theobroma cacao
Thecc1EG014608 5.0kb upstream 5.0kb upstream 9611 true scaffold_3: 23464811-23474421 Theobroma cacao
Thecc1EG014608 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23469422-23474421 Theobroma cacao
Thecc1EG014608 5.0kb downstream 5.0kb downstream 9611 true scaffold_3: 23459811-23469421 Theobroma cacao
Thecc1EG014608 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23459811-23464810 Theobroma cacao
Thecc1EG014608 10.0kb upstream 10.0kb upstream 14611 true scaffold_3: 23464811-23479421 Theobroma cacao
Thecc1EG014608 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23469422-23479421 Theobroma cacao
Thecc1EG014608 10.0kb downstream 10.0kb downstream 14611 true scaffold_3: 23454811-23469421 Theobroma cacao
Thecc1EG014608 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23454811-23464810 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041429 5273 Angiosperm View MSA
123832508 5264 Brassicales-Malvales View MSA
124341527 5266 SBM View MSA
124252076 5268 Malvidae View MSA
124073317 5270 Rosid View MSA
123751861 5271 Pentapetalae View MSA
122792518 5272 Eudicot View MSA
121345676 5274 Embryophyte View MSA
123423772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain