Gene : Thecc1EG014613 T. cacao v1.1
Defline:  (1 of 2) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1301
Name:  ? Thecc1EG014613 Secondary Identifier:  ? PAC:27449567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014613 0.5kb upstream 0.5kb upstream 1270 true scaffold_3: 23493569-23494838 Theobroma cacao
Thecc1EG014613 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23493569-23494068 Theobroma cacao
Thecc1EG014613 0.5kb downstream 0.5kb downstream 1270 true scaffold_3: 23494069-23495338 Theobroma cacao
Thecc1EG014613 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23494839-23495338 Theobroma cacao
Thecc1EG014613 1.0kb upstream 1.0kb upstream 1770 true scaffold_3: 23493069-23494838 Theobroma cacao
Thecc1EG014613 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23493069-23494068 Theobroma cacao
Thecc1EG014613 1.0kb downstream 1.0kb downstream 1770 true scaffold_3: 23494069-23495838 Theobroma cacao
Thecc1EG014613 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23494839-23495838 Theobroma cacao
Thecc1EG014613 2.0kb upstream 2.0kb upstream 2770 true scaffold_3: 23492069-23494838 Theobroma cacao
Thecc1EG014613 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23492069-23494068 Theobroma cacao
Thecc1EG014613 2.0kb downstream 2.0kb downstream 2770 true scaffold_3: 23494069-23496838 Theobroma cacao
Thecc1EG014613 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23494839-23496838 Theobroma cacao
Thecc1EG014613 5.0kb upstream 5.0kb upstream 5770 true scaffold_3: 23489069-23494838 Theobroma cacao
Thecc1EG014613 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23489069-23494068 Theobroma cacao
Thecc1EG014613 5.0kb downstream 5.0kb downstream 5770 true scaffold_3: 23494069-23499838 Theobroma cacao
Thecc1EG014613 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23494839-23499838 Theobroma cacao
Thecc1EG014613 10.0kb upstream 10.0kb upstream 10770 true scaffold_3: 23484069-23494838 Theobroma cacao
Thecc1EG014613 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23484069-23494068 Theobroma cacao
Thecc1EG014613 10.0kb downstream 10.0kb downstream 10770 true scaffold_3: 23494069-23504838 Theobroma cacao
Thecc1EG014613 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23494839-23504838 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837408 5264 Brassicales-Malvales View MSA
124348186 5266 SBM View MSA
124254002 5268 Malvidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain