Gene : Thecc1EG014587 T. cacao v1.1

Defline:  (1 of 1) PTHR22880:SF156 - TRANSCRIPTION FACTOR GTE10 Genomic Order:  1279
Name:  ? Thecc1EG014587 Secondary Identifier:  ? PAC:27448376

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014587 0.5kb upstream 0.5kb upstream 7204 true scaffold_3: 23347806-23355009 Theobroma cacao
Thecc1EG014587 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23354510-23355009 Theobroma cacao
Thecc1EG014587 0.5kb downstream 0.5kb downstream 7204 true scaffold_3: 23347306-23354509 Theobroma cacao
Thecc1EG014587 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23347306-23347805 Theobroma cacao
Thecc1EG014587 1.0kb upstream 1.0kb upstream 7704 true scaffold_3: 23347806-23355509 Theobroma cacao
Thecc1EG014587 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23354510-23355509 Theobroma cacao
Thecc1EG014587 1.0kb downstream 1.0kb downstream 7704 true scaffold_3: 23346806-23354509 Theobroma cacao
Thecc1EG014587 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23346806-23347805 Theobroma cacao
Thecc1EG014587 2.0kb upstream 2.0kb upstream 8704 true scaffold_3: 23347806-23356509 Theobroma cacao
Thecc1EG014587 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23354510-23356509 Theobroma cacao
Thecc1EG014587 2.0kb downstream 2.0kb downstream 8704 true scaffold_3: 23345806-23354509 Theobroma cacao
Thecc1EG014587 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23345806-23347805 Theobroma cacao
Thecc1EG014587 5.0kb upstream 5.0kb upstream 11704 true scaffold_3: 23347806-23359509 Theobroma cacao
Thecc1EG014587 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23354510-23359509 Theobroma cacao
Thecc1EG014587 5.0kb downstream 5.0kb downstream 11704 true scaffold_3: 23342806-23354509 Theobroma cacao
Thecc1EG014587 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23342806-23347805 Theobroma cacao
Thecc1EG014587 10.0kb upstream 10.0kb upstream 16704 true scaffold_3: 23347806-23364509 Theobroma cacao
Thecc1EG014587 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23354510-23364509 Theobroma cacao
Thecc1EG014587 10.0kb downstream 10.0kb downstream 16704 true scaffold_3: 23337806-23354509 Theobroma cacao
Thecc1EG014587 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23337806-23347805 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834310 5264 Brassicales-Malvales View MSA
124339255 5266 SBM View MSA
124251619 5268 Malvidae View MSA
124067873 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain