Gene : Thecc1EG014570 T. cacao v1.1

Defline:  (1 of 1) K03037 - 26S proteasome regulatory subunit N7 (PSMD6, RPN7) Genomic Order:  1263
Name:  ? Thecc1EG014570 Secondary Identifier:  ? PAC:27449914

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014570 0.5kb upstream 0.5kb upstream 4311 true scaffold_3: 23230791-23235101 Theobroma cacao
Thecc1EG014570 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23230791-23231290 Theobroma cacao
Thecc1EG014570 0.5kb downstream 0.5kb downstream 4311 true scaffold_3: 23231291-23235601 Theobroma cacao
Thecc1EG014570 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23235102-23235601 Theobroma cacao
Thecc1EG014570 1.0kb upstream 1.0kb upstream 4811 true scaffold_3: 23230291-23235101 Theobroma cacao
Thecc1EG014570 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23230291-23231290 Theobroma cacao
Thecc1EG014570 1.0kb downstream 1.0kb downstream 4811 true scaffold_3: 23231291-23236101 Theobroma cacao
Thecc1EG014570 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23235102-23236101 Theobroma cacao
Thecc1EG014570 2.0kb upstream 2.0kb upstream 5811 true scaffold_3: 23229291-23235101 Theobroma cacao
Thecc1EG014570 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23229291-23231290 Theobroma cacao
Thecc1EG014570 2.0kb downstream 2.0kb downstream 5811 true scaffold_3: 23231291-23237101 Theobroma cacao
Thecc1EG014570 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23235102-23237101 Theobroma cacao
Thecc1EG014570 5.0kb upstream 5.0kb upstream 8811 true scaffold_3: 23226291-23235101 Theobroma cacao
Thecc1EG014570 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23226291-23231290 Theobroma cacao
Thecc1EG014570 5.0kb downstream 5.0kb downstream 8811 true scaffold_3: 23231291-23240101 Theobroma cacao
Thecc1EG014570 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23235102-23240101 Theobroma cacao
Thecc1EG014570 10.0kb upstream 10.0kb upstream 13811 true scaffold_3: 23221291-23235101 Theobroma cacao
Thecc1EG014570 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23221291-23231290 Theobroma cacao
Thecc1EG014570 10.0kb downstream 10.0kb downstream 13811 true scaffold_3: 23231291-23245101 Theobroma cacao
Thecc1EG014570 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23235102-23245101 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835829 5264 Brassicales-Malvales View MSA
124342441 5266 SBM View MSA
124239112 5268 Malvidae View MSA
124061166 5270 Rosid View MSA
123736562 5271 Pentapetalae View MSA
122788737 5272 Eudicot View MSA
122047339 5273 Angiosperm View MSA
121344552 5274 Embryophyte View MSA
123425003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain