Gene : Thecc1EG014574 T. cacao v1.1

Defline:  (1 of 46) PF03514 - GRAS domain family (GRAS) Genomic Order:  1267
Name:  ? Thecc1EG014574 Secondary Identifier:  ? PAC:27449951

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014574 0.5kb upstream 0.5kb upstream 2498 true scaffold_3: 23249707-23252204 Theobroma cacao
Thecc1EG014574 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23251705-23252204 Theobroma cacao
Thecc1EG014574 0.5kb downstream 0.5kb downstream 2498 true scaffold_3: 23249207-23251704 Theobroma cacao
Thecc1EG014574 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23249207-23249706 Theobroma cacao
Thecc1EG014574 1.0kb upstream 1.0kb upstream 2998 true scaffold_3: 23249707-23252704 Theobroma cacao
Thecc1EG014574 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23251705-23252704 Theobroma cacao
Thecc1EG014574 1.0kb downstream 1.0kb downstream 2998 true scaffold_3: 23248707-23251704 Theobroma cacao
Thecc1EG014574 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23248707-23249706 Theobroma cacao
Thecc1EG014574 2.0kb upstream 2.0kb upstream 3998 true scaffold_3: 23249707-23253704 Theobroma cacao
Thecc1EG014574 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23251705-23253704 Theobroma cacao
Thecc1EG014574 2.0kb downstream 2.0kb downstream 3998 true scaffold_3: 23247707-23251704 Theobroma cacao
Thecc1EG014574 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23247707-23249706 Theobroma cacao
Thecc1EG014574 5.0kb upstream 5.0kb upstream 6998 true scaffold_3: 23249707-23256704 Theobroma cacao
Thecc1EG014574 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23251705-23256704 Theobroma cacao
Thecc1EG014574 5.0kb downstream 5.0kb downstream 6998 true scaffold_3: 23244707-23251704 Theobroma cacao
Thecc1EG014574 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23244707-23249706 Theobroma cacao
Thecc1EG014574 10.0kb upstream 10.0kb upstream 11998 true scaffold_3: 23249707-23261704 Theobroma cacao
Thecc1EG014574 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23251705-23261704 Theobroma cacao
Thecc1EG014574 10.0kb downstream 10.0kb downstream 11998 true scaffold_3: 23239707-23251704 Theobroma cacao
Thecc1EG014574 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23239707-23249706 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826661 5264 Brassicales-Malvales View MSA
124348022 5266 SBM View MSA
124246672 5268 Malvidae View MSA
124070974 5270 Rosid View MSA
123749783 5271 Pentapetalae View MSA
122795701 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain